Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PDE6BP35913 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.4
PDE6BP35913 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.4
PDE6BP35913 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
PDE6BP35913 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PDE6BP35913 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
PDE6BP35913 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.33□□□□□ -1.4
PDE6BP35913 SAMMSON-226ENST00000642089 1582 ntBASIC6.33□□□□□ -1.4
PDE6BP35913 OR4G2P-201ENST00000328113 903 ntBASIC6.33□□□□□ -1.4
PDE6BP35913 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PDE6BP35913 MIR298-201ENST00000401212 88 ntBASIC6.33□□□□□ -1.4
PDE6BP35913 RPS27AP11-201ENST00000402798 447 ntBASIC6.33□□□□□ -1.4
PDE6BP35913 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PDE6BP35913 AC069213.2-201ENST00000420238 366 ntBASIC6.33□□□□□ -1.4
PDE6BP35913 ARL6IP1P2-201ENST00000431356 563 ntBASIC6.33□□□□□ -1.4
PDE6BP35913 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC6.33□□□□□ -1.4
PDE6BP35913 AC023271.1-201ENST00000445936 1090 ntBASIC6.33□□□□□ -1.4
PDE6BP35913 FDX1P2-201ENST00000450769 375 ntBASIC6.33□□□□□ -1.4
PDE6BP35913 AMD1P1-201ENST00000457220 922 ntBASIC6.33□□□□□ -1.4
PDE6BP35913 AC026979.1-201ENST00000492525 396 ntBASIC6.33□□□□□ -1.4
PDE6BP35913 AC010350.1-201ENST00000504908 231 ntBASIC6.33□□□□□ -1.4
PDE6BP35913 KRT19P6-201ENST00000510983 209 ntBASIC6.33□□□□□ -1.4
PDE6BP35913 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC6.33□□□□□ -1.4
PDE6BP35913 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PDE6BP35913 AC114781.4-201ENST00000513707 639 ntBASIC6.33□□□□□ -1.4
PDE6BP35913 RN7SKP141-201ENST00000516167 338 ntBASIC6.33□□□□□ -1.4
PDE6BP35913 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC6.33□□□□□ -1.4
PDE6BP35913 MED28P5-201ENST00000528254 438 ntBASIC6.33□□□□□ -1.4
PDE6BP35913 OR4A43P-201ENST00000532938 908 ntBASIC6.33□□□□□ -1.4
PDE6BP35913 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC6.33□□□□□ -1.4
PDE6BP35913 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC6.33□□□□□ -1.4
PDE6BP35913 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.33□□□□□ -1.4
PDE6BP35913 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC6.33□□□□□ -1.4
PDE6BP35913 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC6.33□□□□□ -1.4
PDE6BP35913 ROCK1P1-201ENST00000573767 549 ntBASIC6.33□□□□□ -1.4
PDE6BP35913 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PDE6BP35913 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC6.33□□□□□ -1.4
PDE6BP35913 AC112230.1-201ENST00000604342 547 ntBASIC6.33□□□□□ -1.4
PDE6BP35913 AL391497.1-201ENST00000608671 547 ntBASIC6.33□□□□□ -1.4
PDE6BP35913 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC6.33□□□□□ -1.4
PDE6BP35913 AC139769.3-201ENST00000618383 175 ntBASIC6.33□□□□□ -1.4
PDE6BP35913 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
PDE6BP35913 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
PDE6BP35913 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PDE6BP35913 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PDE6BP35913 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.33□□□□□ -1.4
PDE6BP35913 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PDE6BP35913 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PDE6BP35913 AC107027.3-201ENST00000565095 3473 ntBASIC6.33□□□□□ -1.4
PDE6BP35913 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PDE6BP35913 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PDE6BP35913 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PDE6BP35913 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC6.32□□□□□ -1.4
PDE6BP35913 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
PDE6BP35913 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC6.32□□□□□ -1.4
PDE6BP35913 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PDE6BP35913 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
PDE6BP35913 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
PDE6BP35913 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PDE6BP35913 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
PDE6BP35913 SNORA75-201ENST00000384158 137 ntBASIC6.32□□□□□ -1.4
PDE6BP35913 Y_RNA.465-201ENST00000384293 102 ntBASIC6.32□□□□□ -1.4
PDE6BP35913 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC6.32□□□□□ -1.4
PDE6BP35913 FNDC3CP-201ENST00000420795 1155 ntBASIC6.32□□□□□ -1.4
PDE6BP35913 AC010975.2-201ENST00000427781 588 ntBASIC6.32□□□□□ -1.4
PDE6BP35913 AC005189.1-201ENST00000431286 310 ntBASIC6.32□□□□□ -1.4
PDE6BP35913 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC6.32□□□□□ -1.4
PDE6BP35913 WASF1P1-201ENST00000447560 1131 ntBASIC6.32□□□□□ -1.4
PDE6BP35913 OR1H1P-201ENST00000448731 937 ntBASIC6.32□□□□□ -1.4
PDE6BP35913 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PDE6BP35913 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC6.32□□□□□ -1.4
PDE6BP35913 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC6.32□□□□□ -1.4
PDE6BP35913 HMGB1P5-202ENST00000451497 985 ntBASIC6.32□□□□□ -1.4
PDE6BP35913 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC6.32□□□□□ -1.4
PDE6BP35913 AC092001.1-201ENST00000453012 261 ntBASIC6.32□□□□□ -1.4
PDE6BP35913 RN7SL443P-201ENST00000464331 290 ntBASIC6.32□□□□□ -1.4
PDE6BP35913 MYL12BP2-201ENST00000503948 512 ntBASIC6.32□□□□□ -1.4
PDE6BP35913 MTATP6P22-201ENST00000507369 598 ntBASIC6.32□□□□□ -1.4
PDE6BP35913 AC113347.3-201ENST00000509113 148 ntBASIC6.32□□□□□ -1.4
PDE6BP35913 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC6.32□□□□□ -1.4
PDE6BP35913 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC6.32□□□□□ -1.4
PDE6BP35913 OR8Q1P-201ENST00000526467 655 ntBASIC6.32□□□□□ -1.4
PDE6BP35913 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC6.32□□□□□ -1.4
PDE6BP35913 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC6.32□□□□□ -1.4
PDE6BP35913 UBE2NP1-201ENST00000545592 458 ntBASIC6.32□□□□□ -1.4
PDE6BP35913 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC6.32□□□□□ -1.4
PDE6BP35913 HIGD1AP17-201ENST00000554576 276 ntBASIC6.32□□□□□ -1.4
PDE6BP35913 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.32□□□□□ -1.4
PDE6BP35913 BNIP3P33-201ENST00000598912 569 ntBASIC6.32□□□□□ -1.4
PDE6BP35913 AL137072.1-201ENST00000603444 466 ntBASIC6.32□□□□□ -1.4
PDE6BP35913 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PDE6BP35913 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC6.32□□□□□ -1.4
PDE6BP35913 AL592221.1-201ENST00000605266 382 ntBASIC6.32□□□□□ -1.4
PDE6BP35913 NDUFA8P1-201ENST00000605525 367 ntBASIC6.32□□□□□ -1.4
PDE6BP35913 OR5AK4P-201ENST00000635912 903 ntBASIC6.32□□□□□ -1.4
PDE6BP35913 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PDE6BP35913 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PDE6BP35913 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.32□□□□□ -1.4
PDE6BP35913 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PDE6BP35913 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms