Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 RAD9B-203ENST00000409246 2794 ntTSL 2 BASIC8.74□□□□□ -1.01
HOXD11P31277 RAD54L-201ENST00000371975 3108 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
HOXD11P31277 CELF2-212ENST00000632728 3827 ntAPPRIS P3 TSL 5 BASIC8.74□□□□□ -1.01
HOXD11P31277 FSD1L-202ENST00000374710 7664 ntTSL 2 BASIC8.74□□□□□ -1.01
HOXD11P31277 AL161636.1-201ENST00000427145 2254 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
HOXD11P31277 MAT2B-202ENST00000321757 2103 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
HOXD11P31277 SAMD8-204ENST00000542569 6782 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
HOXD11P31277 SAMMSON-203ENST00000641005 2168 ntBASIC8.74□□□□□ -1.01
HOXD11P31277 Y_RNA.85-201ENST00000363014 111 ntBASIC8.74□□□□□ -1.01
HOXD11P31277 Y_RNA.229-201ENST00000364347 113 ntBASIC8.74□□□□□ -1.01
HOXD11P31277 SNORA30-201ENST00000384028 129 ntBASIC8.74□□□□□ -1.01
HOXD11P31277 RNU1-74P-201ENST00000384108 171 ntBASIC8.74□□□□□ -1.01
HOXD11P31277 MIRLET7F2-201ENST00000385277 83 ntBASIC8.74□□□□□ -1.01
HOXD11P31277 IGLV3-32-201ENST00000390303 383 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
HOXD11P31277 RNA5SP44-201ENST00000410446 133 ntBASIC8.74□□□□□ -1.01
HOXD11P31277 AL137027.1-201ENST00000440358 444 ntTSL 2 BASIC8.74□□□□□ -1.01
HOXD11P31277 AL157414.2-201ENST00000442780 377 ntTSL 3 BASIC8.74□□□□□ -1.01
HOXD11P31277 RPS14P8-201ENST00000478778 369 ntBASIC8.74□□□□□ -1.01
HOXD11P31277 RPS10P28-201ENST00000480396 498 ntBASIC8.74□□□□□ -1.01
HOXD11P31277 AC139453.2-201ENST00000487255 133 ntBASIC8.74□□□□□ -1.01
HOXD11P31277 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC8.74□□□□□ -1.01
HOXD11P31277 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC8.74□□□□□ -1.01
HOXD11P31277 IGLJCOR18-201ENST00000584002 424 ntBASIC8.74□□□□□ -1.01
HOXD11P31277 MIR6070-201ENST00000613967 103 ntBASIC8.74□□□□□ -1.01
HOXD11P31277 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
HOXD11P31277 ATP6V0D2-201ENST00000285393 2446 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
HOXD11P31277 ETV1-206ENST00000405218 3391 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
HOXD11P31277 NOS1-203ENST00000344089 4340 ntTSL 5 BASIC8.74□□□□□ -1.01
HOXD11P31277 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC8.74□□□□□ -1.01
HOXD11P31277 ZNF726-206ENST00000594466 2473 ntTSL 5 BASIC8.74□□□□□ -1.01
HOXD11P31277 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
HOXD11P31277 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC8.74□□□□□ -1.01
HOXD11P31277 TMOD3-201ENST00000308580 8255 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
HOXD11P31277 AC093535.2-201ENST00000624769 2326 ntBASIC8.74□□□□□ -1.01
HOXD11P31277 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC8.74□□□□□ -1.01
HOXD11P31277 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
HOXD11P31277 NLGN4X-208ENST00000538097 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
HOXD11P31277 C11orf70-201ENST00000434758 2193 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
HOXD11P31277 DICER1-214ENST00000556045 2776 ntTSL 2 BASIC8.73□□□□□ -1.01
HOXD11P31277 ZP2-204ENST00000574091 2241 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
HOXD11P31277 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC8.73□□□□□ -1.01
HOXD11P31277 HSP90AB1-202ENST00000371554 2674 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
HOXD11P31277 HIP1-204ENST00000434438 7066 ntTSL 2 BASIC8.73□□□□□ -1.01
HOXD11P31277 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
HOXD11P31277 AC131649.2-201ENST00000624925 4439 ntBASIC8.73□□□□□ -1.01
HOXD11P31277 MYO1E-201ENST00000288235 8673 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
HOXD11P31277 PIEZO2-203ENST00000503781 8259 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
HOXD11P31277 SPATA19-201ENST00000299140 861 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
HOXD11P31277 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC8.73□□□□□ -1.01
HOXD11P31277 AL358779.1-201ENST00000415465 400 ntTSL 2 BASIC8.73□□□□□ -1.01
HOXD11P31277 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC8.73□□□□□ -1.01
HOXD11P31277 CHCHD2P5-201ENST00000421414 400 ntBASIC8.73□□□□□ -1.01
HOXD11P31277 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC8.73□□□□□ -1.01
HOXD11P31277 AC016712.1-201ENST00000431088 378 ntBASIC8.73□□□□□ -1.01
HOXD11P31277 AC016734.1-201ENST00000436998 654 ntBASIC8.73□□□□□ -1.01
HOXD11P31277 AC004692.1-201ENST00000455430 424 ntBASIC8.73□□□□□ -1.01
HOXD11P31277 MYADML-203ENST00000491596 951 ntBASIC8.73□□□□□ -1.01
HOXD11P31277 MAL2-206ENST00000522187 547 ntTSL 4 BASIC8.73□□□□□ -1.01
HOXD11P31277 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC8.73□□□□□ -1.01
HOXD11P31277 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
HOXD11P31277 RN7SL376P-201ENST00000578594 264 ntBASIC8.73□□□□□ -1.01
HOXD11P31277 RN7SL753P-201ENST00000581238 290 ntBASIC8.73□□□□□ -1.01
HOXD11P31277 AC011444.4-201ENST00000586415 418 ntBASIC8.73□□□□□ -1.01
HOXD11P31277 AC011921.2-201ENST00000589465 152 ntBASIC8.73□□□□□ -1.01
HOXD11P31277 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC8.73□□□□□ -1.01
HOXD11P31277 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC8.73□□□□□ -1.01
HOXD11P31277 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC8.73□□□□□ -1.01
HOXD11P31277 AC092681.2-201ENST00000565102 3044 ntTSL 2 BASIC8.73□□□□□ -1.01
HOXD11P31277 COL21A1-201ENST00000244728 4339 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
HOXD11P31277 TXLNB-201ENST00000358430 4753 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
HOXD11P31277 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
HOXD11P31277 RTN4-206ENST00000394611 4161 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
HOXD11P31277 UBE2V1-223ENST00000617119 2432 ntTSL 4 BASIC8.73□□□□□ -1.01
HOXD11P31277 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
HOXD11P31277 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC8.73□□□□□ -1.01
HOXD11P31277 SP110-215ENST00000540870 2032 ntTSL 2 BASIC8.73□□□□□ -1.01
HOXD11P31277 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC8.73□□□□□ -1.01
HOXD11P31277 AC020978.6-201ENST00000571197 3177 ntBASIC8.73□□□□□ -1.01
HOXD11P31277 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC8.73□□□□□ -1.01
HOXD11P31277 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
HOXD11P31277 BTN3A3-202ENST00000361232 2294 ntAPPRIS ALT2 TSL 2 BASIC8.73□□□□□ -1.01
HOXD11P31277 GLDN-202ENST00000396399 4584 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
HOXD11P31277 SLC17A6-201ENST00000263160 3949 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
HOXD11P31277 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
HOXD11P31277 RABGEF1-203ENST00000439720 3065 ntTSL 2 BASIC8.72□□□□□ -1.01
HOXD11P31277 FTSJ3-201ENST00000427159 3559 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
HOXD11P31277 HNRNPU-216ENST00000638716 2640 ntTSL 5 BASIC8.72□□□□□ -1.01
HOXD11P31277 ALB-214ENST00000509063 1911 ntTSL 5 BASIC8.72□□□□□ -1.01
HOXD11P31277 AC011369.1-201ENST00000517408 2181 ntTSL 3 BASIC8.72□□□□□ -1.01
HOXD11P31277 KIAA1324L-203ENST00000416314 3179 ntAPPRIS P3 TSL 2 BASIC8.72□□□□□ -1.01
HOXD11P31277 CYP4A11-203ENST00000371905 1725 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
HOXD11P31277 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
HOXD11P31277 ARL5C-201ENST00000269586 540 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
HOXD11P31277 TBX5-201ENST00000310346 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
HOXD11P31277 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
HOXD11P31277 RNU6-1134P-201ENST00000365156 101 ntBASIC8.72□□□□□ -1.01
HOXD11P31277 MIR498-201ENST00000385134 124 ntBASIC8.72□□□□□ -1.01
HOXD11P31277 U3.38-201ENST00000408534 216 ntBASIC8.72□□□□□ -1.01
HOXD11P31277 RNU4-43P-201ENST00000410628 137 ntBASIC8.72□□□□□ -1.01
HOXD11P31277 LINC00851-201ENST00000423033 727 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 331 ms