Protein–RNA interactions for Protein: P31274

HOXC9, Homeobox protein Hox-C9, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9P31274 RANP8-201ENST00000444720 713 ntBASIC5.18□□□□□ -1.58
HOXC9P31274 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC5.18□□□□□ -1.58
HOXC9P31274 HMGN1P5-201ENST00000448591 263 ntBASIC5.18□□□□□ -1.58
HOXC9P31274 PDSS1P2-201ENST00000449397 678 ntBASIC5.18□□□□□ -1.58
HOXC9P31274 AL451050.1-201ENST00000450126 415 ntBASIC5.18□□□□□ -1.58
HOXC9P31274 AC010374.2-201ENST00000512933 535 ntBASIC5.18□□□□□ -1.58
HOXC9P31274 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC5.18□□□□□ -1.58
HOXC9P31274 IGKV2D-19-201ENST00000523346 262 ntBASIC5.18□□□□□ -1.58
HOXC9P31274 HAUS1P3-201ENST00000523909 662 ntBASIC5.18□□□□□ -1.58
HOXC9P31274 MTND5P21-201ENST00000531961 522 ntBASIC5.18□□□□□ -1.58
HOXC9P31274 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC5.18□□□□□ -1.58
HOXC9P31274 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HOXC9P31274 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC5.18□□□□□ -1.58
HOXC9P31274 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.18□□□□□ -1.58
HOXC9P31274 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC5.18□□□□□ -1.58
HOXC9P31274 AC074140.1-201ENST00000621617 208 ntBASIC5.18□□□□□ -1.58
HOXC9P31274 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.18□□□□□ -1.58
HOXC9P31274 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HOXC9P31274 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.18□□□□□ -1.58
HOXC9P31274 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
HOXC9P31274 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HOXC9P31274 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.17□□□□□ -1.58
HOXC9P31274 HSPD1P11-201ENST00000508643 1702 ntBASIC5.17□□□□□ -1.58
HOXC9P31274 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HOXC9P31274 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.17□□□□□ -1.58
HOXC9P31274 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HOXC9P31274 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.17□□□□□ -1.58
HOXC9P31274 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
HOXC9P31274 MIR16-2-201ENST00000362117 81 ntBASIC5.17□□□□□ -1.58
HOXC9P31274 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.17□□□□□ -1.58
HOXC9P31274 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC5.17□□□□□ -1.58
HOXC9P31274 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.17□□□□□ -1.58
HOXC9P31274 MIR620-201ENST00000385232 95 ntBASIC5.17□□□□□ -1.58
HOXC9P31274 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HOXC9P31274 TAF9BP2-201ENST00000400856 499 ntBASIC5.17□□□□□ -1.58
HOXC9P31274 HDGFP1-201ENST00000405943 252 ntBASIC5.17□□□□□ -1.58
HOXC9P31274 UQCRFS1P3-201ENST00000407697 385 ntBASIC5.17□□□□□ -1.58
HOXC9P31274 AL035423.1-201ENST00000420331 213 ntBASIC5.17□□□□□ -1.58
HOXC9P31274 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.17□□□□□ -1.58
HOXC9P31274 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HOXC9P31274 RNFT1P2-201ENST00000443064 757 ntBASIC5.17□□□□□ -1.58
HOXC9P31274 MOB1AP2-201ENST00000446060 614 ntBASIC5.17□□□□□ -1.58
HOXC9P31274 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC5.17□□□□□ -1.58
HOXC9P31274 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.17□□□□□ -1.58
HOXC9P31274 UBDP1-202ENST00000457888 382 ntBASIC5.17□□□□□ -1.58
HOXC9P31274 RN7SL585P-201ENST00000470538 280 ntBASIC5.17□□□□□ -1.58
HOXC9P31274 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.17□□□□□ -1.58
HOXC9P31274 SOD1P3-201ENST00000518682 454 ntBASIC5.17□□□□□ -1.58
HOXC9P31274 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC5.17□□□□□ -1.58
HOXC9P31274 AC109635.6-201ENST00000525487 1113 ntBASIC5.17□□□□□ -1.58
HOXC9P31274 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC5.17□□□□□ -1.58
HOXC9P31274 AC087888.1-201ENST00000550884 1254 ntBASIC5.17□□□□□ -1.58
HOXC9P31274 AC084759.1-201ENST00000561168 290 ntBASIC5.17□□□□□ -1.58
HOXC9P31274 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.17□□□□□ -1.58
HOXC9P31274 AC023158.1-201ENST00000561632 1025 ntBASIC5.17□□□□□ -1.58
HOXC9P31274 MIR5187-201ENST00000583479 76 ntBASIC5.17□□□□□ -1.58
HOXC9P31274 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.17□□□□□ -1.58
HOXC9P31274 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.17□□□□□ -1.58
HOXC9P31274 RNU1-30P-201ENST00000606575 163 ntBASIC5.17□□□□□ -1.58
HOXC9P31274 AC018645.2-201ENST00000609151 472 ntBASIC5.17□□□□□ -1.58
HOXC9P31274 AL391261.4-201ENST00000616012 481 ntBASIC5.17□□□□□ -1.58
HOXC9P31274 AL357559.1-201ENST00000622228 274 ntBASIC5.17□□□□□ -1.58
HOXC9P31274 AP000943.4-201ENST00000622912 357 ntBASIC5.17□□□□□ -1.58
HOXC9P31274 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC5.17□□□□□ -1.58
HOXC9P31274 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.17□□□□□ -1.58
HOXC9P31274 AC093591.2-201ENST00000565254 3843 ntBASIC5.17□□□□□ -1.58
HOXC9P31274 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HOXC9P31274 AC092435.4-201ENST00000623012 4159 ntBASIC5.16□□□□□ -1.58
HOXC9P31274 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.16□□□□□ -1.58
HOXC9P31274 RNU6-249P-201ENST00000363016 102 ntBASIC5.16□□□□□ -1.58
HOXC9P31274 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXC9P31274 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXC9P31274 RNU6-729P-201ENST00000384399 107 ntBASIC5.16□□□□□ -1.58
HOXC9P31274 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXC9P31274 TCEA1P2-201ENST00000420496 906 ntBASIC5.16□□□□□ -1.58
HOXC9P31274 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC5.16□□□□□ -1.58
HOXC9P31274 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC5.16□□□□□ -1.58
HOXC9P31274 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC5.16□□□□□ -1.58
HOXC9P31274 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC5.16□□□□□ -1.58
HOXC9P31274 NAMPTP2-201ENST00000505629 1115 ntBASIC5.16□□□□□ -1.58
HOXC9P31274 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.16□□□□□ -1.58
HOXC9P31274 AC104619.4-201ENST00000510773 249 ntBASIC5.16□□□□□ -1.58
HOXC9P31274 MTCYBP19-201ENST00000517463 1124 ntBASIC5.16□□□□□ -1.58
HOXC9P31274 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.16□□□□□ -1.58
HOXC9P31274 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC5.16□□□□□ -1.58
HOXC9P31274 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC5.16□□□□□ -1.58
HOXC9P31274 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC5.16□□□□□ -1.58
HOXC9P31274 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
HOXC9P31274 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC5.16□□□□□ -1.58
HOXC9P31274 MIR3922-201ENST00000585192 84 ntBASIC5.16□□□□□ -1.58
HOXC9P31274 AC068020.1-201ENST00000594215 661 ntBASIC5.16□□□□□ -1.58
HOXC9P31274 AL161756.2-201ENST00000604597 246 ntBASIC5.16□□□□□ -1.58
HOXC9P31274 AC007179.3-201ENST00000604976 235 ntBASIC5.16□□□□□ -1.58
HOXC9P31274 AC110792.4-201ENST00000609843 298 ntBASIC5.16□□□□□ -1.58
HOXC9P31274 AC019176.2-201ENST00000611579 315 ntBASIC5.16□□□□□ -1.58
HOXC9P31274 MIR8084-201ENST00000614105 89 ntBASIC5.16□□□□□ -1.58
HOXC9P31274 AC022306.3-201ENST00000619930 550 ntBASIC5.16□□□□□ -1.58
HOXC9P31274 AL139089.1-201ENST00000620372 975 ntBASIC5.16□□□□□ -1.58
HOXC9P31274 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC5.16□□□□□ -1.58
HOXC9P31274 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms