Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXC8P31273 AC104164.2-201ENST00000496953 495 ntBASIC4.69□□□□□ -1.66
HOXC8P31273 AC023050.1-201ENST00000498198 304 ntBASIC4.69□□□□□ -1.66
HOXC8P31273 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.69□□□□□ -1.66
HOXC8P31273 AC113430.1-201ENST00000506872 718 ntBASIC4.69□□□□□ -1.66
HOXC8P31273 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXC8P31273 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXC8P31273 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.69□□□□□ -1.66
HOXC8P31273 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.69□□□□□ -1.66
HOXC8P31273 FTH1P21-201ENST00000512179 511 ntBASIC4.69□□□□□ -1.66
HOXC8P31273 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXC8P31273 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.69□□□□□ -1.66
HOXC8P31273 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.69□□□□□ -1.66
HOXC8P31273 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC4.69□□□□□ -1.66
HOXC8P31273 AC084757.1-201ENST00000559987 490 ntBASIC4.69□□□□□ -1.66
HOXC8P31273 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.69□□□□□ -1.66
HOXC8P31273 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.69□□□□□ -1.66
HOXC8P31273 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.69□□□□□ -1.66
HOXC8P31273 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXC8P31273 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.69□□□□□ -1.66
HOXC8P31273 AC133552.5-201ENST00000604266 540 ntBASIC4.69□□□□□ -1.66
HOXC8P31273 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.69□□□□□ -1.66
HOXC8P31273 AC245100.7-201ENST00000609678 442 ntBASIC4.69□□□□□ -1.66
HOXC8P31273 AC090912.3-201ENST00000609775 533 ntBASIC4.69□□□□□ -1.66
HOXC8P31273 AC005156.1-201ENST00000613371 573 ntBASIC4.69□□□□□ -1.66
HOXC8P31273 AC018926.1-201ENST00000616335 435 ntBASIC4.69□□□□□ -1.66
HOXC8P31273 AC234782.5-201ENST00000617723 324 ntBASIC4.69□□□□□ -1.66
HOXC8P31273 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.69□□□□□ -1.66
HOXC8P31273 AC024595.1-201ENST00000623088 387 ntBASIC4.69□□□□□ -1.66
HOXC8P31273 AC138907.10-201ENST00000623708 983 ntBASIC4.69□□□□□ -1.66
HOXC8P31273 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.69□□□□□ -1.66
HOXC8P31273 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HOXC8P31273 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
HOXC8P31273 RLIMP1-201ENST00000339626 1680 ntBASIC4.69□□□□□ -1.66
HOXC8P31273 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HOXC8P31273 AL122126.1-201ENST00000546905 1318 ntBASIC4.69□□□□□ -1.66
HOXC8P31273 AC008432.1-201ENST00000615912 1320 ntBASIC4.69□□□□□ -1.66
HOXC8P31273 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.69□□□□□ -1.66
HOXC8P31273 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HOXC8P31273 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.68□□□□□ -1.66
HOXC8P31273 CASC19-261ENST00000641853 1638 ntBASIC4.68□□□□□ -1.66
HOXC8P31273 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HOXC8P31273 SEC63P2-201ENST00000503863 1939 ntBASIC4.68□□□□□ -1.66
HOXC8P31273 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HOXC8P31273 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.68□□□□□ -1.66
HOXC8P31273 LINC01355-201ENST00000566551 5444 ntBASIC4.68□□□□□ -1.66
HOXC8P31273 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
HOXC8P31273 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
HOXC8P31273 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.68□□□□□ -1.66
HOXC8P31273 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HOXC8P31273 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HOXC8P31273 RNA5SP513-201ENST00000364648 118 ntBASIC4.68□□□□□ -1.66
HOXC8P31273 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC4.68□□□□□ -1.66
HOXC8P31273 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
HOXC8P31273 RNU6-1005P-201ENST00000384519 107 ntBASIC4.68□□□□□ -1.66
HOXC8P31273 AL078604.1-201ENST00000404609 466 ntBASIC4.68□□□□□ -1.66
HOXC8P31273 RNU4-27P-201ENST00000410889 139 ntBASIC4.68□□□□□ -1.66
HOXC8P31273 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.68□□□□□ -1.66
HOXC8P31273 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.68□□□□□ -1.66
HOXC8P31273 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.68□□□□□ -1.66
HOXC8P31273 AL512637.2-201ENST00000431287 1256 ntBASIC4.68□□□□□ -1.66
HOXC8P31273 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC4.68□□□□□ -1.66
HOXC8P31273 MTCO1P43-201ENST00000431831 488 ntBASIC4.68□□□□□ -1.66
HOXC8P31273 AC092447.2-201ENST00000435487 669 ntBASIC4.68□□□□□ -1.66
HOXC8P31273 MOB1AP2-201ENST00000446060 614 ntBASIC4.68□□□□□ -1.66
HOXC8P31273 AL031584.1-201ENST00000447169 754 ntBASIC4.68□□□□□ -1.66
HOXC8P31273 SNORA84-201ENST00000459229 133 ntBASIC4.68□□□□□ -1.66
HOXC8P31273 RPL7P22-201ENST00000466005 733 ntBASIC4.68□□□□□ -1.66
HOXC8P31273 AC091153.1-201ENST00000466297 402 ntBASIC4.68□□□□□ -1.66
HOXC8P31273 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.68□□□□□ -1.66
HOXC8P31273 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.68□□□□□ -1.66
HOXC8P31273 SLC25A15P5-201ENST00000508033 253 ntBASIC4.68□□□□□ -1.66
HOXC8P31273 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
HOXC8P31273 AC104108.1-201ENST00000509930 412 ntBASIC4.68□□□□□ -1.66
HOXC8P31273 AC090151.1-201ENST00000520784 730 ntBASIC4.68□□□□□ -1.66
HOXC8P31273 AC022790.1-201ENST00000522872 204 ntBASIC4.68□□□□□ -1.66
HOXC8P31273 PDCD5P1-201ENST00000543528 309 ntBASIC4.68□□□□□ -1.66
HOXC8P31273 AC104229.1-201ENST00000561364 255 ntBASIC4.68□□□□□ -1.66
HOXC8P31273 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.68□□□□□ -1.66
HOXC8P31273 MIR4472-2-201ENST00000582069 67 ntBASIC4.68□□□□□ -1.66
HOXC8P31273 AC053481.4-201ENST00000583164 216 ntBASIC4.68□□□□□ -1.66
HOXC8P31273 RN7SL435P-201ENST00000584418 282 ntBASIC4.68□□□□□ -1.66
HOXC8P31273 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.68□□□□□ -1.66
HOXC8P31273 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
HOXC8P31273 STMN1P1-201ENST00000617809 440 ntBASIC4.68□□□□□ -1.66
HOXC8P31273 AC091046.2-201ENST00000620775 665 ntBASIC4.68□□□□□ -1.66
HOXC8P31273 AP003072.4-201ENST00000624580 310 ntBASIC4.68□□□□□ -1.66
HOXC8P31273 AP003485.1-201ENST00000625093 753 ntBASIC4.68□□□□□ -1.66
HOXC8P31273 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.68□□□□□ -1.66
HOXC8P31273 OR8B1P-202ENST00000641132 1178 ntBASIC4.68□□□□□ -1.66
HOXC8P31273 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HOXC8P31273 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HOXC8P31273 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.68□□□□□ -1.66
HOXC8P31273 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HOXC8P31273 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HOXC8P31273 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HOXC8P31273 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HOXC8P31273 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HOXC8P31273 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXC8P31273 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms