Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 AC015914.2-201ENST00000618167 288 ntBASIC4.91□□□□□ -1.62
BDNFP23560 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.91□□□□□ -1.62
BDNFP23560 MIR7641-1-201ENST00000627518 61 ntBASIC4.91□□□□□ -1.62
BDNFP23560 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
BDNFP23560 KARSP3-201ENST00000571212 1504 ntBASIC4.91□□□□□ -1.62
BDNFP23560 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
BDNFP23560 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
BDNFP23560 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.91□□□□□ -1.62
BDNFP23560 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
BDNFP23560 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.9□□□□□ -1.62
BDNFP23560 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
BDNFP23560 AL157700.1-201ENST00000561973 1432 ntBASIC4.9□□□□□ -1.62
BDNFP23560 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
BDNFP23560 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.9□□□□□ -1.62
BDNFP23560 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
BDNFP23560 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.9□□□□□ -1.62
BDNFP23560 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.9□□□□□ -1.63
BDNFP23560 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
BDNFP23560 AC234772.1-201ENST00000377927 937 ntBASIC4.9□□□□□ -1.63
BDNFP23560 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
BDNFP23560 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
BDNFP23560 RNU6-837P-201ENST00000391056 108 ntBASIC4.9□□□□□ -1.63
BDNFP23560 Z98745.1-201ENST00000402553 494 ntBASIC4.9□□□□□ -1.63
BDNFP23560 MTCO3P31-201ENST00000405526 789 ntBASIC4.9□□□□□ -1.63
BDNFP23560 AC016397.1-201ENST00000412463 242 ntBASIC4.9□□□□□ -1.63
BDNFP23560 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.9□□□□□ -1.63
BDNFP23560 AC009480.2-201ENST00000422916 432 ntBASIC4.9□□□□□ -1.63
BDNFP23560 AC012519.1-201ENST00000424588 610 ntBASIC4.9□□□□□ -1.63
BDNFP23560 RPEP3-201ENST00000425462 676 ntBASIC4.9□□□□□ -1.63
BDNFP23560 UBE2V1P6-201ENST00000430840 422 ntBASIC4.9□□□□□ -1.63
BDNFP23560 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
BDNFP23560 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.9□□□□□ -1.63
BDNFP23560 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.9□□□□□ -1.63
BDNFP23560 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC4.9□□□□□ -1.63
BDNFP23560 SCARNA10-201ENST00000459255 330 ntBASIC4.9□□□□□ -1.63
BDNFP23560 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.9□□□□□ -1.63
BDNFP23560 VWA8P1-201ENST00000510889 176 ntBASIC4.9□□□□□ -1.63
BDNFP23560 RN7SKP116-201ENST00000516902 319 ntBASIC4.9□□□□□ -1.63
BDNFP23560 IGHV3-32-201ENST00000519182 355 ntBASIC4.9□□□□□ -1.63
BDNFP23560 RAB9BP1-201ENST00000519581 626 ntBASIC4.9□□□□□ -1.63
BDNFP23560 OR4C2P-201ENST00000530855 1064 ntBASIC4.9□□□□□ -1.63
BDNFP23560 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.9□□□□□ -1.63
BDNFP23560 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.9□□□□□ -1.63
BDNFP23560 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.9□□□□□ -1.63
BDNFP23560 AC069061.3-201ENST00000582254 823 ntBASIC4.9□□□□□ -1.63
BDNFP23560 AL390816.3-201ENST00000604527 1066 ntBASIC4.9□□□□□ -1.63
BDNFP23560 AL049634.3-201ENST00000604968 457 ntBASIC4.9□□□□□ -1.63
BDNFP23560 AC019193.2-201ENST00000610012 634 ntBASIC4.9□□□□□ -1.63
BDNFP23560 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
BDNFP23560 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.9□□□□□ -1.63
BDNFP23560 AL355852.1-201ENST00000454081 1771 ntBASIC4.9□□□□□ -1.63
BDNFP23560 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.9□□□□□ -1.63
BDNFP23560 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
BDNFP23560 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
BDNFP23560 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
BDNFP23560 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
BDNFP23560 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.9□□□□□ -1.63
BDNFP23560 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
BDNFP23560 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
BDNFP23560 AL592148.3-201ENST00000608771 2646 ntBASIC4.9□□□□□ -1.63
BDNFP23560 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
BDNFP23560 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
BDNFP23560 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.89□□□□□ -1.63
BDNFP23560 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
BDNFP23560 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.89□□□□□ -1.63
BDNFP23560 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.89□□□□□ -1.63
BDNFP23560 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
BDNFP23560 AC021146.4-201ENST00000309229 279 ntBASIC4.89□□□□□ -1.63
BDNFP23560 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
BDNFP23560 SNORA31-201ENST00000362607 130 ntBASIC4.89□□□□□ -1.63
BDNFP23560 RNU1-130P-201ENST00000363930 160 ntBASIC4.89□□□□□ -1.63
BDNFP23560 RNU6-1226P-201ENST00000384317 107 ntBASIC4.89□□□□□ -1.63
BDNFP23560 MIR141-201ENST00000384975 95 ntBASIC4.89□□□□□ -1.63
BDNFP23560 MT-TC-201ENST00000387405 66 ntBASIC4.89□□□□□ -1.63
BDNFP23560 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.89□□□□□ -1.63
BDNFP23560 TAF13P2-201ENST00000416876 286 ntBASIC4.89□□□□□ -1.63
BDNFP23560 UQCRBP1-201ENST00000421129 336 ntBASIC4.89□□□□□ -1.63
BDNFP23560 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.89□□□□□ -1.63
BDNFP23560 ARL4AP4-201ENST00000434170 518 ntBASIC4.89□□□□□ -1.63
BDNFP23560 PPIAP17-201ENST00000438507 471 ntBASIC4.89□□□□□ -1.63
BDNFP23560 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.89□□□□□ -1.63
BDNFP23560 AC073587.1-201ENST00000447093 876 ntBASIC4.89□□□□□ -1.63
BDNFP23560 AL034418.1-201ENST00000448675 860 ntBASIC4.89□□□□□ -1.63
BDNFP23560 FGF7P3-201ENST00000454645 303 ntBASIC4.89□□□□□ -1.63
BDNFP23560 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.89□□□□□ -1.63
BDNFP23560 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.89□□□□□ -1.63
BDNFP23560 PRDX3P4-201ENST00000470828 747 ntBASIC4.89□□□□□ -1.63
BDNFP23560 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.89□□□□□ -1.63
BDNFP23560 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.89□□□□□ -1.63
BDNFP23560 AC005798.1-201ENST00000513715 387 ntBASIC4.89□□□□□ -1.63
BDNFP23560 AP003355.1-201ENST00000518956 587 ntBASIC4.89□□□□□ -1.63
BDNFP23560 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.89□□□□□ -1.63
BDNFP23560 ARL2BPP5-201ENST00000523141 481 ntBASIC4.89□□□□□ -1.63
BDNFP23560 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.89□□□□□ -1.63
BDNFP23560 CYB5AP5-201ENST00000549779 389 ntBASIC4.89□□□□□ -1.63
BDNFP23560 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.89□□□□□ -1.63
BDNFP23560 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.89□□□□□ -1.63
BDNFP23560 MIR4715-201ENST00000584117 79 ntBASIC4.89□□□□□ -1.63
BDNFP23560 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.89□□□□□ -1.63
BDNFP23560 RPL12P25-202ENST00000598100 674 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms