Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 AC068254.2-201ENST00000623938 3577 ntBASIC3.55□□□□□ -1.84
USF1P22415 RNF6P1-201ENST00000444889 1784 ntBASIC3.55□□□□□ -1.84
USF1P22415 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.55□□□□□ -1.84
USF1P22415 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
USF1P22415 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
USF1P22415 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
USF1P22415 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
USF1P22415 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
USF1P22415 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.54□□□□□ -1.84
USF1P22415 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
USF1P22415 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.54□□□□□ -1.84
USF1P22415 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.54□□□□□ -1.84
USF1P22415 MIR23A-201ENST00000385245 73 ntBASIC3.54□□□□□ -1.84
USF1P22415 ATP5F1P3-201ENST00000397213 657 ntBASIC3.54□□□□□ -1.84
USF1P22415 AP000357.1-201ENST00000409926 1165 ntBASIC3.54□□□□□ -1.84
USF1P22415 RN7SKP159-201ENST00000410657 292 ntBASIC3.54□□□□□ -1.84
USF1P22415 RN7SKP167-201ENST00000411047 285 ntBASIC3.54□□□□□ -1.84
USF1P22415 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.54□□□□□ -1.84
USF1P22415 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.54□□□□□ -1.84
USF1P22415 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.54□□□□□ -1.84
USF1P22415 RBMY1KP-201ENST00000423480 476 ntBASIC3.54□□□□□ -1.84
USF1P22415 RPL30P3-201ENST00000424262 333 ntBASIC3.54□□□□□ -1.84
USF1P22415 NANOGP6-201ENST00000429190 847 ntBASIC3.54□□□□□ -1.84
USF1P22415 PRELID3BP10-201ENST00000431957 584 ntBASIC3.54□□□□□ -1.84
USF1P22415 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.54□□□□□ -1.84
USF1P22415 MED6P1-201ENST00000439659 713 ntBASIC3.54□□□□□ -1.84
USF1P22415 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.54□□□□□ -1.84
USF1P22415 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.54□□□□□ -1.84
USF1P22415 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.54□□□□□ -1.84
USF1P22415 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC3.54□□□□□ -1.84
USF1P22415 MTND2P8-201ENST00000450555 1025 ntBASIC3.54□□□□□ -1.84
USF1P22415 HMGB1P5-202ENST00000451497 985 ntBASIC3.54□□□□□ -1.84
USF1P22415 AC090543.1-201ENST00000492168 485 ntBASIC3.54□□□□□ -1.84
USF1P22415 TPT1P3-201ENST00000492841 512 ntBASIC3.54□□□□□ -1.84
USF1P22415 AC010460.1-201ENST00000507087 466 ntBASIC3.54□□□□□ -1.84
USF1P22415 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
USF1P22415 AC010285.3-201ENST00000511668 676 ntBASIC3.54□□□□□ -1.84
USF1P22415 AC022784.5-201ENST00000522241 437 ntBASIC3.54□□□□□ -1.84
USF1P22415 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.54□□□□□ -1.84
USF1P22415 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.54□□□□□ -1.84
USF1P22415 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.54□□□□□ -1.84
USF1P22415 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.54□□□□□ -1.84
USF1P22415 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.54□□□□□ -1.84
USF1P22415 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.54□□□□□ -1.84
USF1P22415 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.54□□□□□ -1.84
USF1P22415 MIR4644-201ENST00000579929 84 ntBASIC3.54□□□□□ -1.84
USF1P22415 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.54□□□□□ -1.84
USF1P22415 NF1P5-201ENST00000588287 448 ntBASIC3.54□□□□□ -1.84
USF1P22415 MTCO3P22-201ENST00000603219 784 ntBASIC3.54□□□□□ -1.84
USF1P22415 AL139395.1-201ENST00000603662 160 ntBASIC3.54□□□□□ -1.84
USF1P22415 AC010680.3-201ENST00000604215 520 ntBASIC3.54□□□□□ -1.84
USF1P22415 AC006133.1-201ENST00000617106 264 ntBASIC3.54□□□□□ -1.84
USF1P22415 AL645927.2-201ENST00000618350 349 ntBASIC3.54□□□□□ -1.84
USF1P22415 AC007546.1-201ENST00000619452 559 ntBASIC3.54□□□□□ -1.84
USF1P22415 CDRT1-208ENST00000630868 794 ntBASIC3.54□□□□□ -1.84
USF1P22415 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.54□□□□□ -1.84
USF1P22415 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.54□□□□□ -1.84
USF1P22415 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
USF1P22415 RLIMP1-201ENST00000339626 1680 ntBASIC3.54□□□□□ -1.84
USF1P22415 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
USF1P22415 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
USF1P22415 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
USF1P22415 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
USF1P22415 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
USF1P22415 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
USF1P22415 AL353743.4-201ENST00000422653 1547 ntBASIC3.54□□□□□ -1.84
USF1P22415 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
USF1P22415 AL139811.1-201ENST00000424779 2299 ntBASIC3.54□□□□□ -1.84
USF1P22415 AC006042.3-201ENST00000454684 1469 ntBASIC3.54□□□□□ -1.84
USF1P22415 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
USF1P22415 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.53□□□□□ -1.84
USF1P22415 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
USF1P22415 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.53□□□□□ -1.84
USF1P22415 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
USF1P22415 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
USF1P22415 RNU6-452P-201ENST00000384406 107 ntBASIC3.53□□□□□ -1.84
USF1P22415 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.53□□□□□ -1.84
USF1P22415 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.53□□□□□ -1.84
USF1P22415 ARL4AP4-201ENST00000434170 518 ntBASIC3.53□□□□□ -1.84
USF1P22415 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
USF1P22415 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.53□□□□□ -1.84
USF1P22415 AL451050.1-201ENST00000450126 415 ntBASIC3.53□□□□□ -1.84
USF1P22415 AL645939.1-201ENST00000453429 797 ntBASIC3.53□□□□□ -1.84
USF1P22415 RPL7P22-201ENST00000466005 733 ntBASIC3.53□□□□□ -1.84
USF1P22415 RN7SL542P-201ENST00000467147 294 ntBASIC3.53□□□□□ -1.84
USF1P22415 VN1R105P-201ENST00000486595 910 ntBASIC3.53□□□□□ -1.84
USF1P22415 AC107398.1-201ENST00000486904 505 ntBASIC3.53□□□□□ -1.84
USF1P22415 RN7SL604P-201ENST00000492589 296 ntBASIC3.53□□□□□ -1.84
USF1P22415 SNORA67.7-201ENST00000516664 135 ntBASIC3.53□□□□□ -1.84
USF1P22415 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.53□□□□□ -1.84
USF1P22415 IFITM8P-201ENST00000522529 394 ntBASIC3.53□□□□□ -1.84
USF1P22415 AC022790.1-201ENST00000522872 204 ntBASIC3.53□□□□□ -1.84
USF1P22415 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.53□□□□□ -1.84
USF1P22415 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.53□□□□□ -1.84
USF1P22415 AC106785.3-201ENST00000564064 847 ntBASIC3.53□□□□□ -1.84
USF1P22415 AC009101.1-201ENST00000568135 242 ntBASIC3.53□□□□□ -1.84
USF1P22415 MIR3158-1-201ENST00000583596 81 ntBASIC3.53□□□□□ -1.84
USF1P22415 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.53□□□□□ -1.84
USF1P22415 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.53□□□□□ -1.84
USF1P22415 AL451086.1-201ENST00000605596 223 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms