Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-DQA2P01906 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.42□□□□□ -1.7
HLA-DQA2P01906 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DQA2P01906 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
HLA-DQA2P01906 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DQA2P01906 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DQA2P01906 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.41□□□□□ -1.7
HLA-DQA2P01906 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DQA2P01906 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DQA2P01906 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DQA2P01906 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DQA2P01906 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DQA2P01906 AL731566.1-201ENST00000620490 1937 ntBASIC4.41□□□□□ -1.7
HLA-DQA2P01906 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DQA2P01906 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.41□□□□□ -1.7
HLA-DQA2P01906 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
HLA-DQA2P01906 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DQA2P01906 RN7SKP162-201ENST00000363605 345 ntBASIC4.41□□□□□ -1.7
HLA-DQA2P01906 Y_RNA.318-201ENST00000365131 97 ntBASIC4.41□□□□□ -1.7
HLA-DQA2P01906 BMS1P3-201ENST00000372011 932 ntBASIC4.41□□□□□ -1.7
HLA-DQA2P01906 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HLA-DQA2P01906 U3.25-201ENST00000391209 220 ntBASIC4.41□□□□□ -1.7
HLA-DQA2P01906 AL450338.1-201ENST00000407987 512 ntBASIC4.41□□□□□ -1.7
HLA-DQA2P01906 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.41□□□□□ -1.7
HLA-DQA2P01906 AC008280.1-201ENST00000418851 412 ntBASIC4.41□□□□□ -1.7
HLA-DQA2P01906 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.41□□□□□ -1.7
HLA-DQA2P01906 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.41□□□□□ -1.7
HLA-DQA2P01906 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.41□□□□□ -1.7
HLA-DQA2P01906 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.41□□□□□ -1.7
HLA-DQA2P01906 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.41□□□□□ -1.7
HLA-DQA2P01906 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.41□□□□□ -1.7
HLA-DQA2P01906 OR52B5P-201ENST00000435337 951 ntBASIC4.41□□□□□ -1.7
HLA-DQA2P01906 AL391987.1-201ENST00000441025 200 ntBASIC4.41□□□□□ -1.7
HLA-DQA2P01906 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.41□□□□□ -1.7
HLA-DQA2P01906 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DQA2P01906 BTF3P6-201ENST00000448054 499 ntBASIC4.41□□□□□ -1.7
HLA-DQA2P01906 OR6C5P-201ENST00000452388 923 ntBASIC4.41□□□□□ -1.7
HLA-DQA2P01906 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DQA2P01906 PPIAP21-201ENST00000464473 501 ntBASIC4.41□□□□□ -1.7
HLA-DQA2P01906 AC090686.1-201ENST00000481577 749 ntBASIC4.41□□□□□ -1.7
HLA-DQA2P01906 HMGN2P25-201ENST00000486956 268 ntBASIC4.41□□□□□ -1.7
HLA-DQA2P01906 AC104685.1-201ENST00000502445 371 ntBASIC4.41□□□□□ -1.7
HLA-DQA2P01906 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.41□□□□□ -1.7
HLA-DQA2P01906 AC024558.1-201ENST00000505008 528 ntBASIC4.41□□□□□ -1.7
HLA-DQA2P01906 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DQA2P01906 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.41□□□□□ -1.7
HLA-DQA2P01906 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DQA2P01906 AP000790.1-201ENST00000528891 737 ntBASIC4.41□□□□□ -1.7
HLA-DQA2P01906 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.41□□□□□ -1.7
HLA-DQA2P01906 AC107918.3-201ENST00000533272 382 ntBASIC4.41□□□□□ -1.7
HLA-DQA2P01906 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.41□□□□□ -1.7
HLA-DQA2P01906 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.41□□□□□ -1.7
HLA-DQA2P01906 LSM3P2-201ENST00000551246 273 ntBASIC4.41□□□□□ -1.7
HLA-DQA2P01906 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DQA2P01906 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.41□□□□□ -1.7
HLA-DQA2P01906 AC090515.3-201ENST00000560431 315 ntBASIC4.41□□□□□ -1.7
HLA-DQA2P01906 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.41□□□□□ -1.7
HLA-DQA2P01906 CYCSP40-201ENST00000575927 294 ntBASIC4.41□□□□□ -1.7
HLA-DQA2P01906 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DQA2P01906 RN7SL435P-201ENST00000584418 282 ntBASIC4.41□□□□□ -1.7
HLA-DQA2P01906 AC105254.2-201ENST00000603636 436 ntBASIC4.41□□□□□ -1.7
HLA-DQA2P01906 AC093765.1-201ENST00000603758 881 ntBASIC4.41□□□□□ -1.7
HLA-DQA2P01906 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DQA2P01906 AC245297.2-201ENST00000610119 565 ntBASIC4.41□□□□□ -1.7
HLA-DQA2P01906 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DQA2P01906 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.41□□□□□ -1.7
HLA-DQA2P01906 AC012414.7-202ENST00000622705 1090 ntBASIC4.41□□□□□ -1.7
HLA-DQA2P01906 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HLA-DQA2P01906 AC092184.1-201ENST00000625042 715 ntBASIC4.41□□□□□ -1.7
HLA-DQA2P01906 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DQA2P01906 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DQA2P01906 OR52B5P-202ENST00000641118 1110 ntBASIC4.41□□□□□ -1.7
HLA-DQA2P01906 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
HLA-DQA2P01906 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DQA2P01906 A2MP1-204ENST00000566278 4130 ntBASIC4.41□□□□□ -1.7
HLA-DQA2P01906 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.41□□□□□ -1.7
HLA-DQA2P01906 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DQA2P01906 AL031119.1-201ENST00000404707 1879 ntBASIC4.41□□□□□ -1.7
HLA-DQA2P01906 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DQA2P01906 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DQA2P01906 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DQA2P01906 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.41□□□□□ -1.7
HLA-DQA2P01906 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.4□□□□□ -1.7
HLA-DQA2P01906 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
HLA-DQA2P01906 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.4□□□□□ -1.7
HLA-DQA2P01906 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
HLA-DQA2P01906 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
HLA-DQA2P01906 STX3-208ENST00000641815 3236 ntBASIC4.4□□□□□ -1.71
HLA-DQA2P01906 U3.2-201ENST00000362981 210 ntBASIC4.4□□□□□ -1.71
HLA-DQA2P01906 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DQA2P01906 SNORD116-9-201ENST00000384000 95 ntBASIC4.4□□□□□ -1.71
HLA-DQA2P01906 SNORD116-3-201ENST00000384287 95 ntBASIC4.4□□□□□ -1.71
HLA-DQA2P01906 RNU5A-2P-201ENST00000384337 116 ntBASIC4.4□□□□□ -1.71
HLA-DQA2P01906 SNORD116-7-201ENST00000384404 95 ntBASIC4.4□□□□□ -1.71
HLA-DQA2P01906 SNORD116-5-201ENST00000384462 95 ntBASIC4.4□□□□□ -1.71
HLA-DQA2P01906 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DQA2P01906 AL121978.1-201ENST00000402778 359 ntBASIC4.4□□□□□ -1.71
HLA-DQA2P01906 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.4□□□□□ -1.71
HLA-DQA2P01906 MIR1286-201ENST00000408112 78 ntBASIC4.4□□□□□ -1.71
HLA-DQA2P01906 MIR1284-201ENST00000408337 120 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms