Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 MTCYBP35-201ENST00000503630 1137 ntBASIC4.45□□□□□ -1.7
LDLRP01130 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.45□□□□□ -1.7
LDLRP01130 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.45□□□□□ -1.7
LDLRP01130 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.45□□□□□ -1.7
LDLRP01130 HMGB1P23-201ENST00000518743 568 ntBASIC4.45□□□□□ -1.7
LDLRP01130 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.45□□□□□ -1.7
LDLRP01130 AC022882.1-201ENST00000532142 501 ntBASIC4.45□□□□□ -1.7
LDLRP01130 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.45□□□□□ -1.7
LDLRP01130 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.45□□□□□ -1.7
LDLRP01130 AC135279.1-201ENST00000543493 504 ntBASIC4.45□□□□□ -1.7
LDLRP01130 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.45□□□□□ -1.7
LDLRP01130 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.45□□□□□ -1.7
LDLRP01130 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.45□□□□□ -1.7
LDLRP01130 AL109766.1-201ENST00000555080 552 ntBASIC4.45□□□□□ -1.7
LDLRP01130 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.45□□□□□ -1.7
LDLRP01130 AC005951.1-201ENST00000576706 485 ntBASIC4.45□□□□□ -1.7
LDLRP01130 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.45□□□□□ -1.7
LDLRP01130 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.45□□□□□ -1.7
LDLRP01130 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.45□□□□□ -1.7
LDLRP01130 AC013444.2-201ENST00000603317 787 ntBASIC4.45□□□□□ -1.7
LDLRP01130 ELOCP35-201ENST00000604289 336 ntBASIC4.45□□□□□ -1.7
LDLRP01130 AC064807.4-201ENST00000607201 407 ntBASIC4.45□□□□□ -1.7
LDLRP01130 AC010424.2-201ENST00000607594 443 ntBASIC4.45□□□□□ -1.7
LDLRP01130 AL157392.4-201ENST00000609756 345 ntBASIC4.45□□□□□ -1.7
LDLRP01130 AC100847.1-201ENST00000611316 481 ntBASIC4.45□□□□□ -1.7
LDLRP01130 SNX18P1Y-201ENST00000616231 511 ntBASIC4.45□□□□□ -1.7
LDLRP01130 U6.48-201ENST00000618523 106 ntBASIC4.45□□□□□ -1.7
LDLRP01130 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.45□□□□□ -1.7
LDLRP01130 AC068620.4-201ENST00000636730 1182 ntBASIC4.45□□□□□ -1.7
LDLRP01130 LINC01808-202ENST00000641680 1116 ntBASIC4.45□□□□□ -1.7
LDLRP01130 AC114546.3-201ENST00000623582 1734 ntBASIC4.45□□□□□ -1.7
LDLRP01130 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
LDLRP01130 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
LDLRP01130 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
LDLRP01130 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.45□□□□□ -1.7
LDLRP01130 CYP1D1P-201ENST00000416662 1433 ntBASIC4.45□□□□□ -1.7
LDLRP01130 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LDLRP01130 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
LDLRP01130 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LDLRP01130 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LDLRP01130 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
LDLRP01130 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.44□□□□□ -1.7
LDLRP01130 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LDLRP01130 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LDLRP01130 AC073055.1-201ENST00000456901 1621 ntBASIC4.44□□□□□ -1.7
LDLRP01130 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LDLRP01130 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LDLRP01130 SNORA70F-201ENST00000384142 135 ntBASIC4.44□□□□□ -1.7
LDLRP01130 RNU6-146P-201ENST00000384602 108 ntBASIC4.44□□□□□ -1.7
LDLRP01130 MIR23B-201ENST00000384832 97 ntBASIC4.44□□□□□ -1.7
LDLRP01130 RNU4-25P-201ENST00000410569 230 ntBASIC4.44□□□□□ -1.7
LDLRP01130 RN7SKP106-201ENST00000410832 272 ntBASIC4.44□□□□□ -1.7
LDLRP01130 NRBF2P3-201ENST00000432731 865 ntBASIC4.44□□□□□ -1.7
LDLRP01130 RPS17P8-201ENST00000434525 335 ntBASIC4.44□□□□□ -1.7
LDLRP01130 AL031663.1-201ENST00000437445 219 ntBASIC4.44□□□□□ -1.7
LDLRP01130 AC005154.2-201ENST00000438110 379 ntBASIC4.44□□□□□ -1.7
LDLRP01130 AC092013.1-201ENST00000438795 332 ntBASIC4.44□□□□□ -1.7
LDLRP01130 CBX1P4-201ENST00000439415 457 ntBASIC4.44□□□□□ -1.7
LDLRP01130 AC068135.1-201ENST00000446164 246 ntBASIC4.44□□□□□ -1.7
LDLRP01130 MTND1P33-201ENST00000446251 917 ntBASIC4.44□□□□□ -1.7
LDLRP01130 SEPT14P24-201ENST00000447236 180 ntBASIC4.44□□□□□ -1.7
LDLRP01130 AC005002.1-201ENST00000447458 540 ntBASIC4.44□□□□□ -1.7
LDLRP01130 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.44□□□□□ -1.7
LDLRP01130 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.44□□□□□ -1.7
LDLRP01130 Z99714.1-201ENST00000450463 807 ntBASIC4.44□□□□□ -1.7
LDLRP01130 MTND2P8-201ENST00000450555 1025 ntBASIC4.44□□□□□ -1.7
LDLRP01130 IFNWP4-201ENST00000453148 294 ntBASIC4.44□□□□□ -1.7
LDLRP01130 AURKAPS2-201ENST00000454983 333 ntBASIC4.44□□□□□ -1.7
LDLRP01130 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC4.44□□□□□ -1.7
LDLRP01130 METTL15P1-201ENST00000481421 1045 ntBASIC4.44□□□□□ -1.7
LDLRP01130 AC013356.1-201ENST00000489027 564 ntBASIC4.44□□□□□ -1.7
LDLRP01130 AC113430.1-201ENST00000506872 718 ntBASIC4.44□□□□□ -1.7
LDLRP01130 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.44□□□□□ -1.7
LDLRP01130 AC093752.1-206ENST00000511823 336 ntBASIC4.44□□□□□ -1.7
LDLRP01130 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.44□□□□□ -1.7
LDLRP01130 AC090819.1-201ENST00000523800 1111 ntBASIC4.44□□□□□ -1.7
LDLRP01130 AC100770.1-201ENST00000532310 322 ntBASIC4.44□□□□□ -1.7
LDLRP01130 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.44□□□□□ -1.7
LDLRP01130 AL049839.1-201ENST00000556151 657 ntBASIC4.44□□□□□ -1.7
LDLRP01130 MTCYBP23-201ENST00000558717 1102 ntBASIC4.44□□□□□ -1.7
LDLRP01130 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.44□□□□□ -1.7
LDLRP01130 CYP2C60P-201ENST00000566088 139 ntBASIC4.44□□□□□ -1.7
LDLRP01130 AC023824.3-201ENST00000569003 562 ntBASIC4.44□□□□□ -1.7
LDLRP01130 MTND6P33-201ENST00000571794 183 ntBASIC4.44□□□□□ -1.7
LDLRP01130 HMGB2P1-201ENST00000591146 634 ntBASIC4.44□□□□□ -1.7
LDLRP01130 BNIP3P24-201ENST00000593398 557 ntBASIC4.44□□□□□ -1.7
LDLRP01130 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.44□□□□□ -1.7
LDLRP01130 RPL7P50-201ENST00000600588 727 ntBASIC4.44□□□□□ -1.7
LDLRP01130 AC013468.1-201ENST00000608680 598 ntBASIC4.44□□□□□ -1.7
LDLRP01130 MIR7973-1-201ENST00000614683 76 ntBASIC4.44□□□□□ -1.7
LDLRP01130 AL121873.1-201ENST00000616013 524 ntBASIC4.44□□□□□ -1.7
LDLRP01130 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.44□□□□□ -1.7
LDLRP01130 AC009237.17-201ENST00000618111 748 ntBASIC4.44□□□□□ -1.7
LDLRP01130 AL022401.1-201ENST00000619498 108 ntBASIC4.44□□□□□ -1.7
LDLRP01130 MIR7154-201ENST00000620673 73 ntBASIC4.44□□□□□ -1.7
LDLRP01130 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.44□□□□□ -1.7
LDLRP01130 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LDLRP01130 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
LDLRP01130 AC010928.1-201ENST00000592477 1447 ntBASIC4.44□□□□□ -1.7
LDLRP01130 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms