Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.33□□□□□ -1.88
UPK1BO75841 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
UPK1BO75841 AL139811.1-201ENST00000424779 2299 ntBASIC3.32□□□□□ -1.88
UPK1BO75841 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
UPK1BO75841 INTS6P1-201ENST00000504674 2530 ntBASIC3.32□□□□□ -1.88
UPK1BO75841 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
UPK1BO75841 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.32□□□□□ -1.88
UPK1BO75841 RNA5SP391-201ENST00000363456 119 ntBASIC3.32□□□□□ -1.88
UPK1BO75841 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
UPK1BO75841 Z86062.1-201ENST00000406773 777 ntBASIC3.32□□□□□ -1.88
UPK1BO75841 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC3.32□□□□□ -1.88
UPK1BO75841 AC069218.2-201ENST00000411665 344 ntBASIC3.32□□□□□ -1.88
UPK1BO75841 ZNF92P1Y-201ENST00000415010 1191 ntBASIC3.32□□□□□ -1.88
UPK1BO75841 AC234782.4-201ENST00000417646 1048 ntBASIC3.32□□□□□ -1.88
UPK1BO75841 RFESDP1-201ENST00000422350 461 ntBASIC3.32□□□□□ -1.88
UPK1BO75841 HIGD1AP12-201ENST00000427832 281 ntBASIC3.32□□□□□ -1.88
UPK1BO75841 USP9YP31-201ENST00000431405 881 ntBASIC3.32□□□□□ -1.88
UPK1BO75841 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC3.32□□□□□ -1.88
UPK1BO75841 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.32□□□□□ -1.88
UPK1BO75841 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
UPK1BO75841 EEF1B2P5-201ENST00000444820 548 ntBASIC3.32□□□□□ -1.88
UPK1BO75841 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.32□□□□□ -1.88
UPK1BO75841 AL162591.2-201ENST00000449634 317 ntBASIC3.32□□□□□ -1.88
UPK1BO75841 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.32□□□□□ -1.88
UPK1BO75841 AC020893.1-201ENST00000502452 580 ntBASIC3.32□□□□□ -1.88
UPK1BO75841 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
UPK1BO75841 AC110792.2-201ENST00000510278 224 ntBASIC3.32□□□□□ -1.88
UPK1BO75841 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.32□□□□□ -1.88
UPK1BO75841 AC004825.1-201ENST00000555068 586 ntBASIC3.32□□□□□ -1.88
UPK1BO75841 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.32□□□□□ -1.88
UPK1BO75841 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC3.32□□□□□ -1.88
UPK1BO75841 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.32□□□□□ -1.88
UPK1BO75841 AC009117.1-201ENST00000563948 554 ntBASIC3.32□□□□□ -1.88
UPK1BO75841 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.32□□□□□ -1.88
UPK1BO75841 SNORD95-201ENST00000579879 68 ntBASIC3.32□□□□□ -1.88
UPK1BO75841 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.32□□□□□ -1.88
UPK1BO75841 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.32□□□□□ -1.88
UPK1BO75841 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC3.32□□□□□ -1.88
UPK1BO75841 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.32□□□□□ -1.88
UPK1BO75841 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
UPK1BO75841 AC009948.4-201ENST00000604692 675 ntBASIC3.32□□□□□ -1.88
UPK1BO75841 AP003117.2-201ENST00000606010 545 ntBASIC3.32□□□□□ -1.88
UPK1BO75841 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.32□□□□□ -1.88
UPK1BO75841 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC3.32□□□□□ -1.88
UPK1BO75841 AL049536.1-201ENST00000625043 744 ntBASIC3.32□□□□□ -1.88
UPK1BO75841 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.32□□□□□ -1.88
UPK1BO75841 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
UPK1BO75841 AC138393.1-206ENST00000540997 1886 ntBASIC3.32□□□□□ -1.88
UPK1BO75841 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
UPK1BO75841 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
UPK1BO75841 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
UPK1BO75841 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.32□□□□□ -1.88
UPK1BO75841 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
UPK1BO75841 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.31□□□□□ -1.88
UPK1BO75841 AL136964.1-201ENST00000622038 2990 ntBASIC3.31□□□□□ -1.88
UPK1BO75841 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.31□□□□□ -1.88
UPK1BO75841 DDX6P1-205ENST00000441966 1436 ntBASIC3.31□□□□□ -1.88
UPK1BO75841 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
UPK1BO75841 DCAF13P3-201ENST00000561147 1334 ntBASIC3.31□□□□□ -1.88
UPK1BO75841 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
UPK1BO75841 RNA5SP123-201ENST00000363244 119 ntBASIC3.31□□□□□ -1.88
UPK1BO75841 RNU4-31P-201ENST00000384211 141 ntBASIC3.31□□□□□ -1.88
UPK1BO75841 MIR143-201ENST00000385300 106 ntBASIC3.31□□□□□ -1.88
UPK1BO75841 CCNB2P1-201ENST00000399411 1150 ntBASIC3.31□□□□□ -1.88
UPK1BO75841 AL590290.1-201ENST00000405336 380 ntBASIC3.31□□□□□ -1.88
UPK1BO75841 MTCO3P4-201ENST00000419236 787 ntBASIC3.31□□□□□ -1.88
UPK1BO75841 AC093162.1-201ENST00000419682 124 ntBASIC3.31□□□□□ -1.88
UPK1BO75841 PTP4A1P5-201ENST00000420305 455 ntBASIC3.31□□□□□ -1.88
UPK1BO75841 GLRXP1-201ENST00000423261 334 ntBASIC3.31□□□□□ -1.88
UPK1BO75841 AL732292.1-201ENST00000426692 226 ntBASIC3.31□□□□□ -1.88
UPK1BO75841 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.31□□□□□ -1.88
UPK1BO75841 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.31□□□□□ -1.88
UPK1BO75841 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC3.31□□□□□ -1.88
UPK1BO75841 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC3.31□□□□□ -1.88
UPK1BO75841 AC023141.9-201ENST00000458734 412 ntBASIC3.31□□□□□ -1.88
UPK1BO75841 RPL37P6-202ENST00000464216 403 ntBASIC3.31□□□□□ -1.88
UPK1BO75841 RPL21P126-201ENST00000470049 478 ntBASIC3.31□□□□□ -1.88
UPK1BO75841 RN7SL741P-201ENST00000482473 289 ntBASIC3.31□□□□□ -1.88
UPK1BO75841 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.31□□□□□ -1.88
UPK1BO75841 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.31□□□□□ -1.88
UPK1BO75841 SSX6-203ENST00000509958 336 ntTSL 3 BASIC3.31□□□□□ -1.88
UPK1BO75841 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.31□□□□□ -1.88
UPK1BO75841 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.31□□□□□ -1.88
UPK1BO75841 PTP4A1P6-201ENST00000531034 478 ntBASIC3.31□□□□□ -1.88
UPK1BO75841 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.31□□□□□ -1.88
UPK1BO75841 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.31□□□□□ -1.88
UPK1BO75841 NOP56P3-201ENST00000549457 385 ntBASIC3.31□□□□□ -1.88
UPK1BO75841 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC3.31□□□□□ -1.88
UPK1BO75841 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC3.31□□□□□ -1.88
UPK1BO75841 AC020978.7-201ENST00000575953 1187 ntBASIC3.31□□□□□ -1.88
UPK1BO75841 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.31□□□□□ -1.88
UPK1BO75841 AC115621.1-201ENST00000604653 858 ntBASIC3.31□□□□□ -1.88
UPK1BO75841 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.31□□□□□ -1.88
UPK1BO75841 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.31□□□□□ -1.88
UPK1BO75841 AP005019.3-201ENST00000620418 560 ntBASIC3.31□□□□□ -1.88
UPK1BO75841 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.31□□□□□ -1.88
UPK1BO75841 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
UPK1BO75841 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
UPK1BO75841 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
UPK1BO75841 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms