Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 FAM25E-202ENST00000608562 189 ntBASIC5.49□□□□□ -1.53
PRPF3O43395 AC090246.1-201ENST00000616499 426 ntBASIC5.49□□□□□ -1.53
PRPF3O43395 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.49□□□□□ -1.53
PRPF3O43395 AP003485.2-201ENST00000623636 610 ntBASIC5.49□□□□□ -1.53
PRPF3O43395 AC120349.3-201ENST00000624377 529 ntBASIC5.49□□□□□ -1.53
PRPF3O43395 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC5.49□□□□□ -1.53
PRPF3O43395 AL445487.1-201ENST00000415694 1580 ntBASIC5.49□□□□□ -1.53
PRPF3O43395 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PRPF3O43395 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PRPF3O43395 CYP1D1P-201ENST00000416662 1433 ntBASIC5.48□□□□□ -1.53
PRPF3O43395 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.48□□□□□ -1.53
PRPF3O43395 ASNSP1-201ENST00000518311 1939 ntBASIC5.48□□□□□ -1.53
PRPF3O43395 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PRPF3O43395 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.48□□□□□ -1.53
PRPF3O43395 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PRPF3O43395 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PRPF3O43395 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.48□□□□□ -1.53
PRPF3O43395 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PRPF3O43395 MTND5P31-201ENST00000419366 1374 ntBASIC5.48□□□□□ -1.53
PRPF3O43395 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PRPF3O43395 Y_RNA.192-201ENST00000363977 102 ntBASIC5.48□□□□□ -1.53
PRPF3O43395 UBBP2-201ENST00000376781 231 ntBASIC5.48□□□□□ -1.53
PRPF3O43395 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
PRPF3O43395 AP000580.1-201ENST00000404439 358 ntBASIC5.48□□□□□ -1.53
PRPF3O43395 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PRPF3O43395 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.48□□□□□ -1.53
PRPF3O43395 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.48□□□□□ -1.53
PRPF3O43395 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.48□□□□□ -1.53
PRPF3O43395 OR6C64P-201ENST00000419708 825 ntBASIC5.48□□□□□ -1.53
PRPF3O43395 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.48□□□□□ -1.53
PRPF3O43395 AL139421.1-201ENST00000423010 169 ntBASIC5.48□□□□□ -1.53
PRPF3O43395 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.48□□□□□ -1.53
PRPF3O43395 UBE2V1P1-201ENST00000430836 445 ntBASIC5.48□□□□□ -1.53
PRPF3O43395 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.48□□□□□ -1.53
PRPF3O43395 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.48□□□□□ -1.53
PRPF3O43395 AL008629.1-201ENST00000438615 184 ntBASIC5.48□□□□□ -1.53
PRPF3O43395 RPL23AP76-201ENST00000441860 458 ntBASIC5.48□□□□□ -1.53
PRPF3O43395 RAB11AP1-201ENST00000442978 646 ntBASIC5.48□□□□□ -1.53
PRPF3O43395 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.48□□□□□ -1.53
PRPF3O43395 AC079168.2-201ENST00000453977 416 ntBASIC5.48□□□□□ -1.53
PRPF3O43395 ACTG1P13-201ENST00000486987 1043 ntBASIC5.48□□□□□ -1.53
PRPF3O43395 AC231760.1-201ENST00000498002 260 ntBASIC5.48□□□□□ -1.53
PRPF3O43395 KRT19P6-201ENST00000510983 209 ntBASIC5.48□□□□□ -1.53
PRPF3O43395 OR7H2P-201ENST00000513483 306 ntBASIC5.48□□□□□ -1.53
PRPF3O43395 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC5.48□□□□□ -1.53
PRPF3O43395 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC5.48□□□□□ -1.53
PRPF3O43395 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.48□□□□□ -1.53
PRPF3O43395 AP003461.1-201ENST00000528866 78 ntBASIC5.48□□□□□ -1.53
PRPF3O43395 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.48□□□□□ -1.53
PRPF3O43395 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.48□□□□□ -1.53
PRPF3O43395 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC5.48□□□□□ -1.53
PRPF3O43395 AL390334.1-201ENST00000556395 450 ntBASIC5.48□□□□□ -1.53
PRPF3O43395 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.48□□□□□ -1.53
PRPF3O43395 RN7SL435P-201ENST00000584418 282 ntBASIC5.48□□□□□ -1.53
PRPF3O43395 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.48□□□□□ -1.53
PRPF3O43395 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.48□□□□□ -1.53
PRPF3O43395 AC011477.5-201ENST00000586571 259 ntBASIC5.48□□□□□ -1.53
PRPF3O43395 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.48□□□□□ -1.53
PRPF3O43395 AC021171.1-201ENST00000603137 706 ntBASIC5.48□□□□□ -1.53
PRPF3O43395 AC004987.4-201ENST00000603383 338 ntBASIC5.48□□□□□ -1.53
PRPF3O43395 AC024940.4-201ENST00000605507 246 ntBASIC5.48□□□□□ -1.53
PRPF3O43395 AL359535.1-201ENST00000612100 1087 ntBASIC5.48□□□□□ -1.53
PRPF3O43395 MIR8069-1-201ENST00000616627 86 ntBASIC5.48□□□□□ -1.53
PRPF3O43395 MIR8069-2-201ENST00000621412 86 ntBASIC5.48□□□□□ -1.53
PRPF3O43395 AC068057.2-201ENST00000624047 895 ntBASIC5.48□□□□□ -1.53
PRPF3O43395 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.48□□□□□ -1.53
PRPF3O43395 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PRPF3O43395 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.48□□□□□ -1.53
PRPF3O43395 Z95331.1-201ENST00000623075 23112 ntBASIC5.48□□□□□ -1.53
PRPF3O43395 AC073429.2-201ENST00000569694 1444 ntBASIC5.48□□□□□ -1.53
PRPF3O43395 DCAF13P3-201ENST00000561147 1334 ntBASIC5.48□□□□□ -1.53
PRPF3O43395 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PRPF3O43395 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.47□□□□□ -1.53
PRPF3O43395 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.47□□□□□ -1.53
PRPF3O43395 ERCC6-202ENST00000374127 1782 ntBASIC5.47□□□□□ -1.53
PRPF3O43395 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
PRPF3O43395 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PRPF3O43395 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PRPF3O43395 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PRPF3O43395 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
PRPF3O43395 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
PRPF3O43395 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PRPF3O43395 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PRPF3O43395 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PRPF3O43395 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.47□□□□□ -1.53
PRPF3O43395 RNU6-251P-201ENST00000363235 104 ntBASIC5.47□□□□□ -1.53
PRPF3O43395 RNU6-621P-201ENST00000364752 109 ntBASIC5.47□□□□□ -1.53
PRPF3O43395 AL592291.1-201ENST00000403830 352 ntBASIC5.47□□□□□ -1.53
PRPF3O43395 BX510359.2-201ENST00000417920 305 ntBASIC5.47□□□□□ -1.53
PRPF3O43395 MFSD13B-201ENST00000420133 1290 ntBASIC5.47□□□□□ -1.53
PRPF3O43395 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC5.47□□□□□ -1.53
PRPF3O43395 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC5.47□□□□□ -1.53
PRPF3O43395 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.47□□□□□ -1.53
PRPF3O43395 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC5.47□□□□□ -1.53
PRPF3O43395 MTND5P25-201ENST00000430499 799 ntBASIC5.47□□□□□ -1.53
PRPF3O43395 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.47□□□□□ -1.53
PRPF3O43395 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.47□□□□□ -1.53
PRPF3O43395 AC010881.1-201ENST00000433830 235 ntBASIC5.47□□□□□ -1.53
PRPF3O43395 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.47□□□□□ -1.53
PRPF3O43395 AL645937.3-201ENST00000453647 936 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms