Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 U3.2-201ENST00000362981 210 ntBASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 SNORD6-201ENST00000365444 73 ntBASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 SNORA67-201ENST00000384423 137 ntBASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 RNU1-77P-201ENST00000390868 162 ntBASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 MIR1183-201ENST00000408856 89 ntBASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 TBCAP2-201ENST00000416175 326 ntBASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 AC006548.1-201ENST00000427470 102 ntBASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 NEK4P1-201ENST00000433383 879 ntBASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 KNOP1P3-201ENST00000446933 426 ntBASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 RPS24P6-201ENST00000452670 400 ntBASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 BTF3P5-201ENST00000457252 467 ntBASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 AC015908.1-201ENST00000478739 476 ntBASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 AC008897.1-201ENST00000494006 347 ntBASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 RPS6P4-201ENST00000494693 758 ntBASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 AC016550.1-201ENST00000505348 785 ntBASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 OR5D15P-201ENST00000531671 942 ntBASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 AC126177.5-201ENST00000549599 178 ntBASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 AL121603.1-201ENST00000553815 142 ntBASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 VN1R87P-201ENST00000596706 487 ntBASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 AC105254.2-201ENST00000603636 436 ntBASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 AC128687.1-201ENST00000605304 619 ntBASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 AC006023.2-201ENST00000609916 167 ntBASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 CR381572.1-201ENST00000625098 102 ntBASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 U6.98-201ENST00000637157 84 ntBASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.81□□□□□ -1.64
HMGB1P1B2RPK0 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMGB1P1B2RPK0 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
HMGB1P1B2RPK0 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HMGB1P1B2RPK0 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.81□□□□□ -1.64
HMGB1P1B2RPK0 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HMGB1P1B2RPK0 MIR93-201ENST00000385024 80 ntBASIC4.81□□□□□ -1.64
HMGB1P1B2RPK0 RNU6-821P-201ENST00000390995 107 ntBASIC4.81□□□□□ -1.64
HMGB1P1B2RPK0 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HMGB1P1B2RPK0 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.81□□□□□ -1.64
HMGB1P1B2RPK0 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HMGB1P1B2RPK0 RNA5SP104-201ENST00000410989 118 ntBASIC4.81□□□□□ -1.64
HMGB1P1B2RPK0 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.81□□□□□ -1.64
HMGB1P1B2RPK0 AC027644.1-201ENST00000419595 298 ntBASIC4.81□□□□□ -1.64
HMGB1P1B2RPK0 MTCO3P1-205ENST00000422088 832 ntBASIC4.81□□□□□ -1.64
HMGB1P1B2RPK0 RPL21P91-201ENST00000429231 479 ntBASIC4.81□□□□□ -1.64
HMGB1P1B2RPK0 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
HMGB1P1B2RPK0 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.81□□□□□ -1.64
HMGB1P1B2RPK0 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC4.81□□□□□ -1.64
HMGB1P1B2RPK0 EEF1B2P3-201ENST00000447718 678 ntBASIC4.81□□□□□ -1.64
HMGB1P1B2RPK0 RPS20P24-201ENST00000457473 361 ntBASIC4.81□□□□□ -1.64
HMGB1P1B2RPK0 RN7SL97P-201ENST00000486780 299 ntBASIC4.81□□□□□ -1.64
HMGB1P1B2RPK0 AC106806.2-201ENST00000509365 500 ntBASIC4.81□□□□□ -1.64
HMGB1P1B2RPK0 USP9YP5-201ENST00000511770 630 ntBASIC4.81□□□□□ -1.64
HMGB1P1B2RPK0 SNORA48.10-201ENST00000516965 160 ntBASIC4.81□□□□□ -1.64
HMGB1P1B2RPK0 RNU6-467P-201ENST00000517027 110 ntBASIC4.81□□□□□ -1.64
HMGB1P1B2RPK0 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.81□□□□□ -1.64
HMGB1P1B2RPK0 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.81□□□□□ -1.64
HMGB1P1B2RPK0 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.81□□□□□ -1.64
HMGB1P1B2RPK0 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HMGB1P1B2RPK0 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.81□□□□□ -1.64
HMGB1P1B2RPK0 NMNAT1P1-201ENST00000554095 876 ntBASIC4.81□□□□□ -1.64
HMGB1P1B2RPK0 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.81□□□□□ -1.64
HMGB1P1B2RPK0 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.81□□□□□ -1.64
HMGB1P1B2RPK0 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.81□□□□□ -1.64
HMGB1P1B2RPK0 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.81□□□□□ -1.64
HMGB1P1B2RPK0 AC008966.2-201ENST00000606157 453 ntBASIC4.81□□□□□ -1.64
HMGB1P1B2RPK0 AC010424.2-201ENST00000607594 443 ntBASIC4.81□□□□□ -1.64
HMGB1P1B2RPK0 AL512506.2-201ENST00000624472 458 ntBASIC4.81□□□□□ -1.64
HMGB1P1B2RPK0 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.81□□□□□ -1.64
HMGB1P1B2RPK0 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.81□□□□□ -1.64
HMGB1P1B2RPK0 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMGB1P1B2RPK0 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMGB1P1B2RPK0 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.81□□□□□ -1.64
HMGB1P1B2RPK0 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HMGB1P1B2RPK0 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMGB1P1B2RPK0 AC000367.1-201ENST00000452711 1766 ntBASIC4.81□□□□□ -1.64
HMGB1P1B2RPK0 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.81□□□□□ -1.64
HMGB1P1B2RPK0 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HMGB1P1B2RPK0 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HMGB1P1B2RPK0 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HMGB1P1B2RPK0 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.8□□□□□ -1.64
HMGB1P1B2RPK0 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
HMGB1P1B2RPK0 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.8□□□□□ -1.64
HMGB1P1B2RPK0 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
HMGB1P1B2RPK0 RNU6-251P-201ENST00000363235 104 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms