Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.07□□□□□ -1.92
TCRBV4S1A1TA0A5B7 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TCRBV4S1A1TA0A5B7 OR4A12P-201ENST00000530847 918 ntBASIC3.07□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.07□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.07□□□□□ -1.92
TCRBV4S1A1TA0A5B7 Z82195.1-201ENST00000604558 398 ntBASIC3.07□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.07□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.07□□□□□ -1.92
TCRBV4S1A1TA0A5B7 FP236240.3-201ENST00000623061 327 ntBASIC3.07□□□□□ -1.92
TCRBV4S1A1TA0A5B7 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.07□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AL133412.1-201ENST00000380194 2992 ntBASIC3.07□□□□□ -1.92
TCRBV4S1A1TA0A5B7 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC090971.4-201ENST00000560291 1800 ntBASIC3.07□□□□□ -1.92
TCRBV4S1A1TA0A5B7 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC3.07□□□□□ -1.92
TCRBV4S1A1TA0A5B7 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.07□□□□□ -1.92
TCRBV4S1A1TA0A5B7 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.06□□□□□ -1.92
TCRBV4S1A1TA0A5B7 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TCRBV4S1A1TA0A5B7 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TCRBV4S1A1TA0A5B7 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TCRBV4S1A1TA0A5B7 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
TCRBV4S1A1TA0A5B7 RNU1-87P-201ENST00000363727 170 ntBASIC3.06□□□□□ -1.92
TCRBV4S1A1TA0A5B7 RNA5SP399-201ENST00000364003 117 ntBASIC3.06□□□□□ -1.92
TCRBV4S1A1TA0A5B7 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TCRBV4S1A1TA0A5B7 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.06□□□□□ -1.92
TCRBV4S1A1TA0A5B7 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TCRBV4S1A1TA0A5B7 RPL5P19-201ENST00000404228 893 ntBASIC3.06□□□□□ -1.92
TCRBV4S1A1TA0A5B7 HSPE1P8-201ENST00000406997 288 ntBASIC3.06□□□□□ -1.92
TCRBV4S1A1TA0A5B7 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.06□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AL389915.1-201ENST00000422463 466 ntBASIC3.06□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AL139247.1-201ENST00000422768 325 ntBASIC3.06□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.06□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC009263.1-201ENST00000441193 1239 ntBASIC3.06□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC3.06□□□□□ -1.92
TCRBV4S1A1TA0A5B7 RANP8-201ENST00000444720 713 ntBASIC3.06□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AL133547.1-201ENST00000448546 220 ntBASIC3.06□□□□□ -1.92
TCRBV4S1A1TA0A5B7 CYCSP53-201ENST00000455540 265 ntBASIC3.06□□□□□ -1.92
TCRBV4S1A1TA0A5B7 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
TCRBV4S1A1TA0A5B7 ACTR3P3-201ENST00000480448 893 ntBASIC3.06□□□□□ -1.92
TCRBV4S1A1TA0A5B7 NIPA2P2-201ENST00000496376 1083 ntBASIC3.06□□□□□ -1.92
TCRBV4S1A1TA0A5B7 HMGN1P11-201ENST00000508668 303 ntBASIC3.06□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC095050.2-201ENST00000510748 1458 ntBASIC3.06□□□□□ -1.92
TCRBV4S1A1TA0A5B7 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.06□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.06□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.06□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.06□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC090877.1-201ENST00000561418 344 ntBASIC3.06□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AL109741.3-201ENST00000561748 592 ntBASIC3.06□□□□□ -1.92
TCRBV4S1A1TA0A5B7 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC3.06□□□□□ -1.92
TCRBV4S1A1TA0A5B7 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.06□□□□□ -1.92
TCRBV4S1A1TA0A5B7 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.06□□□□□ -1.92
TCRBV4S1A1TA0A5B7 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.06□□□□□ -1.92
TCRBV4S1A1TA0A5B7 BNIP3P22-201ENST00000593399 556 ntBASIC3.06□□□□□ -1.92
TCRBV4S1A1TA0A5B7 BRDTP1-201ENST00000605735 677 ntBASIC3.06□□□□□ -1.92
TCRBV4S1A1TA0A5B7 U7.8-201ENST00000619968 63 ntBASIC3.06□□□□□ -1.92
TCRBV4S1A1TA0A5B7 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
TCRBV4S1A1TA0A5B7 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TCRBV4S1A1TA0A5B7 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
TCRBV4S1A1TA0A5B7 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.06□□□□□ -1.92
TCRBV4S1A1TA0A5B7 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.05□□□□□ -1.92
TCRBV4S1A1TA0A5B7 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.05□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.05□□□□□ -1.92
TCRBV4S1A1TA0A5B7 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
TCRBV4S1A1TA0A5B7 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
TCRBV4S1A1TA0A5B7 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.05□□□□□ -1.92
TCRBV4S1A1TA0A5B7 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.05□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
TCRBV4S1A1TA0A5B7 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.05□□□□□ -1.92
TCRBV4S1A1TA0A5B7 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.05□□□□□ -1.92
TCRBV4S1A1TA0A5B7 EIF2S2P4-201ENST00000461070 984 ntBASIC3.05□□□□□ -1.92
TCRBV4S1A1TA0A5B7 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.05□□□□□ -1.92
TCRBV4S1A1TA0A5B7 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.05□□□□□ -1.92
TCRBV4S1A1TA0A5B7 RN7SKP209-201ENST00000516888 304 ntBASIC3.05□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC008802.1-201ENST00000519121 791 ntBASIC3.05□□□□□ -1.92
TCRBV4S1A1TA0A5B7 IGHV3-32-201ENST00000519182 355 ntBASIC3.05□□□□□ -1.92
TCRBV4S1A1TA0A5B7 TRMT10BP1-201ENST00000519377 943 ntBASIC3.05□□□□□ -1.92
TCRBV4S1A1TA0A5B7 SUMO2P20-201ENST00000520803 283 ntBASIC3.05□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.05□□□□□ -1.92
TCRBV4S1A1TA0A5B7 DEFB109D-201ENST00000529497 240 ntBASIC3.05□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.05□□□□□ -1.92
TCRBV4S1A1TA0A5B7 NPM1P47-201ENST00000560843 856 ntBASIC3.05□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.05□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AGGF1P8-201ENST00000562979 1000 ntBASIC3.05□□□□□ -1.92
TCRBV4S1A1TA0A5B7 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.05□□□□□ -1.92
TCRBV4S1A1TA0A5B7 SNX6P1-201ENST00000601728 1224 ntBASIC3.05□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC008739.3-201ENST00000603262 127 ntBASIC3.05□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AL390816.3-201ENST00000604527 1066 ntBASIC3.05□□□□□ -1.92
TCRBV4S1A1TA0A5B7 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.05□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AL391497.1-201ENST00000608671 547 ntBASIC3.05□□□□□ -1.92
TCRBV4S1A1TA0A5B7 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TCRBV4S1A1TA0A5B7 uc_338.32-201ENST00000615087 172 ntBASIC3.05□□□□□ -1.92
TCRBV4S1A1TA0A5B7 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TCRBV4S1A1TA0A5B7 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AF001550.2-201ENST00000636643 217 ntBASIC3.05□□□□□ -1.92
TCRBV4S1A1TA0A5B7 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
TCRBV4S1A1TA0A5B7 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms