Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
CDC42BPBQ9Y5S2 AC020907.5-201ENST00000624372 1936 ntBASIC29.32■■■□□ 2.28
CDC42BPBQ9Y5S2 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC29.32■■■□□ 2.28
CDC42BPBQ9Y5S2 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC29.32■■■□□ 2.28
CDC42BPBQ9Y5S2 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
CDC42BPBQ9Y5S2 AC073314.1-201ENST00000568729 2216 ntBASIC29.32■■■□□ 2.28
CDC42BPBQ9Y5S2 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
CDC42BPBQ9Y5S2 AP005212.1-201ENST00000581547 1997 ntBASIC29.32■■■□□ 2.28
CDC42BPBQ9Y5S2 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
CDC42BPBQ9Y5S2 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
CDC42BPBQ9Y5S2 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
CDC42BPBQ9Y5S2 AC140113.3-201ENST00000605663 199 ntBASIC29.32■■■□□ 2.28
CDC42BPBQ9Y5S2 IRF5-214ENST00000613821 595 ntTSL 5 BASIC29.32■■■□□ 2.28
CDC42BPBQ9Y5S2 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
CDC42BPBQ9Y5S2 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
CDC42BPBQ9Y5S2 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC29.32■■■□□ 2.28
CDC42BPBQ9Y5S2 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
CDC42BPBQ9Y5S2 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC29.32■■■□□ 2.28
CDC42BPBQ9Y5S2 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
CDC42BPBQ9Y5S2 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC29.31■■■□□ 2.28
CDC42BPBQ9Y5S2 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC29.31■■■□□ 2.28
CDC42BPBQ9Y5S2 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC29.31■■■□□ 2.28
CDC42BPBQ9Y5S2 AC009237.14-201ENST00000609975 1594 ntBASIC29.31■■■□□ 2.28
CDC42BPBQ9Y5S2 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
CDC42BPBQ9Y5S2 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC29.31■■■□□ 2.28
CDC42BPBQ9Y5S2 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
CDC42BPBQ9Y5S2 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC29.31■■■□□ 2.28
CDC42BPBQ9Y5S2 DET1-207ENST00000564406 2315 ntTSL 2 BASIC29.31■■■□□ 2.28
CDC42BPBQ9Y5S2 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC29.31■■■□□ 2.28
CDC42BPBQ9Y5S2 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC29.31■■■□□ 2.28
CDC42BPBQ9Y5S2 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CDC42BPBQ9Y5S2 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CDC42BPBQ9Y5S2 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC29.31■■■□□ 2.28
CDC42BPBQ9Y5S2 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC29.31■■■□□ 2.28
CDC42BPBQ9Y5S2 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC29.31■■■□□ 2.28
CDC42BPBQ9Y5S2 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC29.31■■■□□ 2.28
CDC42BPBQ9Y5S2 PRR29-207ENST00000580752 458 ntTSL 3 BASIC29.31■■■□□ 2.28
CDC42BPBQ9Y5S2 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CDC42BPBQ9Y5S2 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC29.3■■■□□ 2.28
CDC42BPBQ9Y5S2 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
CDC42BPBQ9Y5S2 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
CDC42BPBQ9Y5S2 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
CDC42BPBQ9Y5S2 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC29.3■■■□□ 2.28
CDC42BPBQ9Y5S2 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC29.3■■■□□ 2.28
CDC42BPBQ9Y5S2 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
CDC42BPBQ9Y5S2 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
CDC42BPBQ9Y5S2 FGF14-AS2-201ENST00000606448 1074 ntBASIC29.3■■■□□ 2.28
CDC42BPBQ9Y5S2 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC29.3■■■□□ 2.28
CDC42BPBQ9Y5S2 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC29.3■■■□□ 2.28
CDC42BPBQ9Y5S2 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
CDC42BPBQ9Y5S2 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
CDC42BPBQ9Y5S2 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC29.3■■■□□ 2.28
CDC42BPBQ9Y5S2 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC29.3■■■□□ 2.28
CDC42BPBQ9Y5S2 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC29.3■■■□□ 2.28
CDC42BPBQ9Y5S2 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC29.3■■■□□ 2.28
CDC42BPBQ9Y5S2 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
CDC42BPBQ9Y5S2 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC29.3■■■□□ 2.28
CDC42BPBQ9Y5S2 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CDC42BPBQ9Y5S2 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC29.29■■■□□ 2.28
CDC42BPBQ9Y5S2 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
CDC42BPBQ9Y5S2 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC29.29■■■□□ 2.28
CDC42BPBQ9Y5S2 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC29.29■■■□□ 2.28
CDC42BPBQ9Y5S2 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC29.29■■■□□ 2.28
CDC42BPBQ9Y5S2 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
CDC42BPBQ9Y5S2 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
CDC42BPBQ9Y5S2 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CDC42BPBQ9Y5S2 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CDC42BPBQ9Y5S2 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CDC42BPBQ9Y5S2 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CDC42BPBQ9Y5S2 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC29.28■■■□□ 2.28
CDC42BPBQ9Y5S2 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC29.28■■■□□ 2.28
CDC42BPBQ9Y5S2 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC29.28■■■□□ 2.28
CDC42BPBQ9Y5S2 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC29.28■■■□□ 2.28
CDC42BPBQ9Y5S2 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC29.28■■■□□ 2.28
CDC42BPBQ9Y5S2 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC29.28■■■□□ 2.28
CDC42BPBQ9Y5S2 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CDC42BPBQ9Y5S2 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC29.28■■■□□ 2.28
CDC42BPBQ9Y5S2 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC29.28■■■□□ 2.28
CDC42BPBQ9Y5S2 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CDC42BPBQ9Y5S2 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
CDC42BPBQ9Y5S2 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC29.28■■■□□ 2.28
CDC42BPBQ9Y5S2 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC29.28■■■□□ 2.28
CDC42BPBQ9Y5S2 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CDC42BPBQ9Y5S2 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC29.28■■■□□ 2.28
CDC42BPBQ9Y5S2 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC29.28■■■□□ 2.28
CDC42BPBQ9Y5S2 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC29.28■■■□□ 2.28
CDC42BPBQ9Y5S2 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CDC42BPBQ9Y5S2 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CDC42BPBQ9Y5S2 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CDC42BPBQ9Y5S2 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
CDC42BPBQ9Y5S2 RASA4DP-201ENST00000460726 1199 ntBASIC29.27■■■□□ 2.28
CDC42BPBQ9Y5S2 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC29.27■■■□□ 2.28
CDC42BPBQ9Y5S2 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC29.27■■■□□ 2.28
CDC42BPBQ9Y5S2 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
CDC42BPBQ9Y5S2 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC29.27■■■□□ 2.28
CDC42BPBQ9Y5S2 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
CDC42BPBQ9Y5S2 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CDC42BPBQ9Y5S2 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC29.27■■■□□ 2.28
CDC42BPBQ9Y5S2 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
CDC42BPBQ9Y5S2 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms