Protein–RNA interactions for Protein: Q9NZR4

VSX1, Visual system homeobox 1, humanhuman

Predicted RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1Q9NZR4 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.26■□□□□ 0.35
VSX1Q9NZR4 AC104417.2-201ENST00000562989 1793 ntBASIC17.26■□□□□ 0.35
VSX1Q9NZR4 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.26■□□□□ 0.35
VSX1Q9NZR4 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
VSX1Q9NZR4 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VSX1Q9NZR4 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.26■□□□□ 0.35
VSX1Q9NZR4 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
VSX1Q9NZR4 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.26■□□□□ 0.35
VSX1Q9NZR4 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.26■□□□□ 0.35
VSX1Q9NZR4 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
VSX1Q9NZR4 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.26■□□□□ 0.35
VSX1Q9NZR4 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
VSX1Q9NZR4 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VSX1Q9NZR4 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VSX1Q9NZR4 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
VSX1Q9NZR4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VSX1Q9NZR4 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
VSX1Q9NZR4 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
VSX1Q9NZR4 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
VSX1Q9NZR4 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VSX1Q9NZR4 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VSX1Q9NZR4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.26■□□□□ 0.35
VSX1Q9NZR4 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
VSX1Q9NZR4 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
VSX1Q9NZR4 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VSX1Q9NZR4 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VSX1Q9NZR4 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
VSX1Q9NZR4 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.25■□□□□ 0.35
VSX1Q9NZR4 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VSX1Q9NZR4 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VSX1Q9NZR4 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.25■□□□□ 0.35
VSX1Q9NZR4 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VSX1Q9NZR4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VSX1Q9NZR4 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VSX1Q9NZR4 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VSX1Q9NZR4 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VSX1Q9NZR4 HCG11-201ENST00000411553 5696 ntBASIC17.25■□□□□ 0.35
VSX1Q9NZR4 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VSX1Q9NZR4 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VSX1Q9NZR4 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.25■□□□□ 0.35
VSX1Q9NZR4 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VSX1Q9NZR4 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
VSX1Q9NZR4 UNC93B4-201ENST00000505679 747 ntBASIC17.25■□□□□ 0.35
VSX1Q9NZR4 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.25■□□□□ 0.35
VSX1Q9NZR4 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
VSX1Q9NZR4 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
VSX1Q9NZR4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VSX1Q9NZR4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
VSX1Q9NZR4 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VSX1Q9NZR4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.25■□□□□ 0.35
VSX1Q9NZR4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VSX1Q9NZR4 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VSX1Q9NZR4 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
VSX1Q9NZR4 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VSX1Q9NZR4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VSX1Q9NZR4 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
VSX1Q9NZR4 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VSX1Q9NZR4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.24■□□□□ 0.35
VSX1Q9NZR4 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.24■□□□□ 0.35
VSX1Q9NZR4 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.24■□□□□ 0.35
VSX1Q9NZR4 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VSX1Q9NZR4 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VSX1Q9NZR4 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
VSX1Q9NZR4 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.24■□□□□ 0.35
VSX1Q9NZR4 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.24■□□□□ 0.35
VSX1Q9NZR4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
VSX1Q9NZR4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
VSX1Q9NZR4 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VSX1Q9NZR4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VSX1Q9NZR4 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VSX1Q9NZR4 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VSX1Q9NZR4 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
VSX1Q9NZR4 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VSX1Q9NZR4 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.24■□□□□ 0.35
VSX1Q9NZR4 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
VSX1Q9NZR4 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VSX1Q9NZR4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
VSX1Q9NZR4 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VSX1Q9NZR4 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VSX1Q9NZR4 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VSX1Q9NZR4 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VSX1Q9NZR4 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
VSX1Q9NZR4 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.23■□□□□ 0.35
VSX1Q9NZR4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
VSX1Q9NZR4 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
VSX1Q9NZR4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VSX1Q9NZR4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.23■□□□□ 0.35
VSX1Q9NZR4 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VSX1Q9NZR4 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.23■□□□□ 0.35
VSX1Q9NZR4 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VSX1Q9NZR4 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
VSX1Q9NZR4 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
VSX1Q9NZR4 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VSX1Q9NZR4 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
VSX1Q9NZR4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VSX1Q9NZR4 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
VSX1Q9NZR4 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VSX1Q9NZR4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VSX1Q9NZR4 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.23■□□□□ 0.35
VSX1Q9NZR4 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms