Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
LRTM1Q9HBL6 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
LRTM1Q9HBL6 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRTM1Q9HBL6 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.59■□□□□ 0.57
LRTM1Q9HBL6 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRTM1Q9HBL6 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRTM1Q9HBL6 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRTM1Q9HBL6 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
LRTM1Q9HBL6 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.59■□□□□ 0.57
LRTM1Q9HBL6 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LRTM1Q9HBL6 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.58■□□□□ 0.57
LRTM1Q9HBL6 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LRTM1Q9HBL6 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.58■□□□□ 0.57
LRTM1Q9HBL6 AC104417.2-201ENST00000562989 1793 ntBASIC18.58■□□□□ 0.57
LRTM1Q9HBL6 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
LRTM1Q9HBL6 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LRTM1Q9HBL6 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.58■□□□□ 0.57
LRTM1Q9HBL6 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
LRTM1Q9HBL6 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
LRTM1Q9HBL6 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LRTM1Q9HBL6 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.58■□□□□ 0.56
LRTM1Q9HBL6 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.58■□□□□ 0.56
LRTM1Q9HBL6 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.58■□□□□ 0.56
LRTM1Q9HBL6 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.58■□□□□ 0.56
LRTM1Q9HBL6 AC098934.4-201ENST00000564127 592 ntBASIC18.58■□□□□ 0.56
LRTM1Q9HBL6 AC120498.8-201ENST00000614275 531 ntBASIC18.58■□□□□ 0.56
LRTM1Q9HBL6 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.58■□□□□ 0.56
LRTM1Q9HBL6 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRTM1Q9HBL6 AL049812.1-201ENST00000432563 2267 ntBASIC18.58■□□□□ 0.56
LRTM1Q9HBL6 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRTM1Q9HBL6 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRTM1Q9HBL6 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRTM1Q9HBL6 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
LRTM1Q9HBL6 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRTM1Q9HBL6 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LRTM1Q9HBL6 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRTM1Q9HBL6 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.57■□□□□ 0.56
LRTM1Q9HBL6 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LRTM1Q9HBL6 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LRTM1Q9HBL6 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.57■□□□□ 0.56
LRTM1Q9HBL6 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.57■□□□□ 0.56
LRTM1Q9HBL6 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
LRTM1Q9HBL6 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRTM1Q9HBL6 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
LRTM1Q9HBL6 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LRTM1Q9HBL6 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRTM1Q9HBL6 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
LRTM1Q9HBL6 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRTM1Q9HBL6 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRTM1Q9HBL6 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
LRTM1Q9HBL6 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRTM1Q9HBL6 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
LRTM1Q9HBL6 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.57■□□□□ 0.56
LRTM1Q9HBL6 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.57■□□□□ 0.56
LRTM1Q9HBL6 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.57■□□□□ 0.56
LRTM1Q9HBL6 AL138781.1-201ENST00000566567 1274 ntBASIC18.57■□□□□ 0.56
LRTM1Q9HBL6 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.57■□□□□ 0.56
LRTM1Q9HBL6 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.57■□□□□ 0.56
LRTM1Q9HBL6 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.57■□□□□ 0.56
LRTM1Q9HBL6 AC083880.1-201ENST00000608266 535 ntBASIC18.57■□□□□ 0.56
LRTM1Q9HBL6 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.57■□□□□ 0.56
LRTM1Q9HBL6 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.57■□□□□ 0.56
LRTM1Q9HBL6 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
LRTM1Q9HBL6 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
LRTM1Q9HBL6 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRTM1Q9HBL6 SDHAP1-207ENST00000440850 2000 ntBASIC18.57■□□□□ 0.56
LRTM1Q9HBL6 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
LRTM1Q9HBL6 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
LRTM1Q9HBL6 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LRTM1Q9HBL6 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
LRTM1Q9HBL6 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.57■□□□□ 0.56
LRTM1Q9HBL6 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRTM1Q9HBL6 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRTM1Q9HBL6 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRTM1Q9HBL6 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRTM1Q9HBL6 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.56■□□□□ 0.56
LRTM1Q9HBL6 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
LRTM1Q9HBL6 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRTM1Q9HBL6 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.56■□□□□ 0.56
LRTM1Q9HBL6 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.56■□□□□ 0.56
LRTM1Q9HBL6 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRTM1Q9HBL6 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
LRTM1Q9HBL6 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRTM1Q9HBL6 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRTM1Q9HBL6 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRTM1Q9HBL6 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.56■□□□□ 0.56
LRTM1Q9HBL6 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.56■□□□□ 0.56
LRTM1Q9HBL6 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.56■□□□□ 0.56
LRTM1Q9HBL6 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRTM1Q9HBL6 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRTM1Q9HBL6 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRTM1Q9HBL6 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRTM1Q9HBL6 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRTM1Q9HBL6 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.56■□□□□ 0.56
LRTM1Q9HBL6 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.55■□□□□ 0.56
LRTM1Q9HBL6 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
LRTM1Q9HBL6 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.55■□□□□ 0.56
LRTM1Q9HBL6 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRTM1Q9HBL6 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRTM1Q9HBL6 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms