Protein–RNA interactions for Protein: Q9H2X0

CHRD, Chordin, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDQ9H2X0 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.43■□□□□ 0.7
CHRDQ9H2X0 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.43■□□□□ 0.7
CHRDQ9H2X0 AC092119.3-201ENST00000612618 583 ntBASIC19.43■□□□□ 0.7
CHRDQ9H2X0 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CHRDQ9H2X0 AF106564.1-201ENST00000607058 2553 ntBASIC19.43■□□□□ 0.7
CHRDQ9H2X0 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.43■□□□□ 0.7
CHRDQ9H2X0 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHRDQ9H2X0 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.43■□□□□ 0.7
CHRDQ9H2X0 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHRDQ9H2X0 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHRDQ9H2X0 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRDQ9H2X0 AC026310.3-201ENST00000625186 2373 ntBASIC19.42■□□□□ 0.7
CHRDQ9H2X0 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
CHRDQ9H2X0 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRDQ9H2X0 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHRDQ9H2X0 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.42■□□□□ 0.7
CHRDQ9H2X0 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.42■□□□□ 0.7
CHRDQ9H2X0 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRDQ9H2X0 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRDQ9H2X0 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRDQ9H2X0 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.42■□□□□ 0.7
CHRDQ9H2X0 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.42■□□□□ 0.7
CHRDQ9H2X0 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRDQ9H2X0 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.42■□□□□ 0.7
CHRDQ9H2X0 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.42■□□□□ 0.7
CHRDQ9H2X0 MIR3652-201ENST00000579335 131 ntBASIC19.42■□□□□ 0.7
CHRDQ9H2X0 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.42■□□□□ 0.7
CHRDQ9H2X0 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHRDQ9H2X0 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRDQ9H2X0 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.42■□□□□ 0.7
CHRDQ9H2X0 KRT8P11-201ENST00000409686 1436 ntBASIC19.42■□□□□ 0.7
CHRDQ9H2X0 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRDQ9H2X0 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.41■□□□□ 0.7
CHRDQ9H2X0 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHRDQ9H2X0 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHRDQ9H2X0 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHRDQ9H2X0 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.41■□□□□ 0.7
CHRDQ9H2X0 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.41■□□□□ 0.7
CHRDQ9H2X0 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.41■□□□□ 0.7
CHRDQ9H2X0 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHRDQ9H2X0 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHRDQ9H2X0 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHRDQ9H2X0 PRELID1P1-202ENST00000567272 903 ntBASIC19.41■□□□□ 0.7
CHRDQ9H2X0 RN7SL510P-201ENST00000581311 263 ntBASIC19.41■□□□□ 0.7
CHRDQ9H2X0 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CHRDQ9H2X0 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHRDQ9H2X0 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.41■□□□□ 0.7
CHRDQ9H2X0 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHRDQ9H2X0 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHRDQ9H2X0 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHRDQ9H2X0 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHRDQ9H2X0 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CHRDQ9H2X0 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.4■□□□□ 0.7
CHRDQ9H2X0 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRDQ9H2X0 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRDQ9H2X0 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRDQ9H2X0 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRDQ9H2X0 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CHRDQ9H2X0 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHRDQ9H2X0 HBZP1-201ENST00000354915 429 ntBASIC19.4■□□□□ 0.7
CHRDQ9H2X0 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRDQ9H2X0 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CHRDQ9H2X0 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.4■□□□□ 0.7
CHRDQ9H2X0 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.4■□□□□ 0.7
CHRDQ9H2X0 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.4■□□□□ 0.7
CHRDQ9H2X0 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.4■□□□□ 0.7
CHRDQ9H2X0 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.4■□□□□ 0.7
CHRDQ9H2X0 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHRDQ9H2X0 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRDQ9H2X0 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CHRDQ9H2X0 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRDQ9H2X0 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRDQ9H2X0 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.4■□□□□ 0.7
CHRDQ9H2X0 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRDQ9H2X0 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRDQ9H2X0 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRDQ9H2X0 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CHRDQ9H2X0 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRDQ9H2X0 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.4■□□□□ 0.7
CHRDQ9H2X0 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRDQ9H2X0 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CHRDQ9H2X0 PKD1P6-201ENST00000343738 4769 ntBASIC19.39■□□□□ 0.7
CHRDQ9H2X0 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRDQ9H2X0 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CHRDQ9H2X0 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.39■□□□□ 0.69
CHRDQ9H2X0 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CHRDQ9H2X0 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.39■□□□□ 0.69
CHRDQ9H2X0 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.39■□□□□ 0.69
CHRDQ9H2X0 AL645929.1-201ENST00000420084 975 ntBASIC19.39■□□□□ 0.69
CHRDQ9H2X0 FDX1P1-201ENST00000449115 551 ntBASIC19.39■□□□□ 0.69
CHRDQ9H2X0 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.39■□□□□ 0.69
CHRDQ9H2X0 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.39■□□□□ 0.69
CHRDQ9H2X0 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.39■□□□□ 0.69
CHRDQ9H2X0 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.39■□□□□ 0.69
CHRDQ9H2X0 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CHRDQ9H2X0 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRDQ9H2X0 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRDQ9H2X0 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.39■□□□□ 0.69
CHRDQ9H2X0 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.39■□□□□ 0.69
CHRDQ9H2X0 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms