Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC3Q9BY71 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
LRRC3Q9BY71 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC3Q9BY71 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC3Q9BY71 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC3Q9BY71 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC3Q9BY71 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC3Q9BY71 AK4P3-201ENST00000418260 669 ntBASIC20.19■□□□□ 0.82
LRRC3Q9BY71 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.19■□□□□ 0.82
LRRC3Q9BY71 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.19■□□□□ 0.82
LRRC3Q9BY71 CA15P1-201ENST00000481698 905 ntBASIC20.19■□□□□ 0.82
LRRC3Q9BY71 AC063952.2-201ENST00000498792 1227 ntBASIC20.19■□□□□ 0.82
LRRC3Q9BY71 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.19■□□□□ 0.82
LRRC3Q9BY71 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC3Q9BY71 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC3Q9BY71 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
LRRC3Q9BY71 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.19■□□□□ 0.82
LRRC3Q9BY71 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
LRRC3Q9BY71 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.19■□□□□ 0.82
LRRC3Q9BY71 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC3Q9BY71 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC3Q9BY71 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC3Q9BY71 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC3Q9BY71 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC3Q9BY71 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC3Q9BY71 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.18■□□□□ 0.82
LRRC3Q9BY71 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC3Q9BY71 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.18■□□□□ 0.82
LRRC3Q9BY71 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.18■□□□□ 0.82
LRRC3Q9BY71 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC3Q9BY71 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.18■□□□□ 0.82
LRRC3Q9BY71 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC3Q9BY71 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.18■□□□□ 0.82
LRRC3Q9BY71 TSPY17P-201ENST00000450329 467 ntBASIC20.18■□□□□ 0.82
LRRC3Q9BY71 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC3Q9BY71 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.18■□□□□ 0.82
LRRC3Q9BY71 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
LRRC3Q9BY71 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC3Q9BY71 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
LRRC3Q9BY71 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
LRRC3Q9BY71 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC3Q9BY71 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
LRRC3Q9BY71 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
LRRC3Q9BY71 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.18■□□□□ 0.82
LRRC3Q9BY71 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.18■□□□□ 0.82
LRRC3Q9BY71 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC3Q9BY71 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC3Q9BY71 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
LRRC3Q9BY71 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC3Q9BY71 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC3Q9BY71 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC3Q9BY71 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
LRRC3Q9BY71 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC3Q9BY71 AC092667.1-201ENST00000434301 2586 ntBASIC20.17■□□□□ 0.82
LRRC3Q9BY71 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC3Q9BY71 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC3Q9BY71 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.17■□□□□ 0.82
LRRC3Q9BY71 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC3Q9BY71 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC3Q9BY71 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC3Q9BY71 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC3Q9BY71 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC3Q9BY71 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC3Q9BY71 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC3Q9BY71 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.17■□□□□ 0.82
LRRC3Q9BY71 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.17■□□□□ 0.82
LRRC3Q9BY71 AC022616.7-201ENST00000525383 220 ntBASIC20.17■□□□□ 0.82
LRRC3Q9BY71 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.17■□□□□ 0.82
LRRC3Q9BY71 AC139887.4-201ENST00000607877 719 ntBASIC20.17■□□□□ 0.82
LRRC3Q9BY71 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC3Q9BY71 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC3Q9BY71 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC3Q9BY71 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.17■□□□□ 0.82
LRRC3Q9BY71 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
LRRC3Q9BY71 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
LRRC3Q9BY71 AC099778.1-201ENST00000568593 1911 ntBASIC20.17■□□□□ 0.82
LRRC3Q9BY71 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC3Q9BY71 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
LRRC3Q9BY71 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.17■□□□□ 0.82
LRRC3Q9BY71 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC3Q9BY71 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC3Q9BY71 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC3Q9BY71 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC3Q9BY71 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC3Q9BY71 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRRC3Q9BY71 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.16■□□□□ 0.82
LRRC3Q9BY71 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
LRRC3Q9BY71 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRRC3Q9BY71 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRRC3Q9BY71 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRRC3Q9BY71 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRRC3Q9BY71 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
LRRC3Q9BY71 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.16■□□□□ 0.82
LRRC3Q9BY71 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.16■□□□□ 0.82
LRRC3Q9BY71 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
LRRC3Q9BY71 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LRRC3Q9BY71 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.16■□□□□ 0.82
LRRC3Q9BY71 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRRC3Q9BY71 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRRC3Q9BY71 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms