Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.69■□□□□ 0.74
COL25A1Q9BXS0 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
COL25A1Q9BXS0 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
COL25A1Q9BXS0 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.69■□□□□ 0.74
COL25A1Q9BXS0 BCRP1-201ENST00000444246 691 ntBASIC19.69■□□□□ 0.74
COL25A1Q9BXS0 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.69■□□□□ 0.74
COL25A1Q9BXS0 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.69■□□□□ 0.74
COL25A1Q9BXS0 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.69■□□□□ 0.74
COL25A1Q9BXS0 MIR4674-201ENST00000582457 87 ntBASIC19.69■□□□□ 0.74
COL25A1Q9BXS0 AC024243.1-201ENST00000609234 778 ntBASIC19.69■□□□□ 0.74
COL25A1Q9BXS0 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL25A1Q9BXS0 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL25A1Q9BXS0 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL25A1Q9BXS0 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.69■□□□□ 0.74
COL25A1Q9BXS0 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.69■□□□□ 0.74
COL25A1Q9BXS0 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL25A1Q9BXS0 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL25A1Q9BXS0 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL25A1Q9BXS0 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
COL25A1Q9BXS0 AC093323.1-202ENST00000635031 2045 ntBASIC19.68■□□□□ 0.74
COL25A1Q9BXS0 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL25A1Q9BXS0 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.68■□□□□ 0.74
COL25A1Q9BXS0 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.68■□□□□ 0.74
COL25A1Q9BXS0 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL25A1Q9BXS0 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL25A1Q9BXS0 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
COL25A1Q9BXS0 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.68■□□□□ 0.74
COL25A1Q9BXS0 HNRNPDP1-201ENST00000439535 754 ntBASIC19.68■□□□□ 0.74
COL25A1Q9BXS0 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL25A1Q9BXS0 DUX4L17-201ENST00000557360 1267 ntBASIC19.68■□□□□ 0.74
COL25A1Q9BXS0 SNHG9-202ENST00000564014 471 ntBASIC19.68■□□□□ 0.74
COL25A1Q9BXS0 AL096865.1-201ENST00000606796 927 ntBASIC19.68■□□□□ 0.74
COL25A1Q9BXS0 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL25A1Q9BXS0 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL25A1Q9BXS0 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL25A1Q9BXS0 NSUN5P1-202ENST00000421140 1535 ntBASIC19.67■□□□□ 0.74
COL25A1Q9BXS0 NSUN5P2-203ENST00000457352 1529 ntBASIC19.67■□□□□ 0.74
COL25A1Q9BXS0 Z83836.1-201ENST00000624605 1642 ntBASIC19.67■□□□□ 0.74
COL25A1Q9BXS0 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.67■□□□□ 0.74
COL25A1Q9BXS0 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.67■□□□□ 0.74
COL25A1Q9BXS0 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
COL25A1Q9BXS0 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.67■□□□□ 0.74
COL25A1Q9BXS0 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COL25A1Q9BXS0 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC19.67■□□□□ 0.74
COL25A1Q9BXS0 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.67■□□□□ 0.74
COL25A1Q9BXS0 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.67■□□□□ 0.74
COL25A1Q9BXS0 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL25A1Q9BXS0 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.67■□□□□ 0.74
COL25A1Q9BXS0 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.67■□□□□ 0.74
COL25A1Q9BXS0 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COL25A1Q9BXS0 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.66■□□□□ 0.74
COL25A1Q9BXS0 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL25A1Q9BXS0 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL25A1Q9BXS0 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
COL25A1Q9BXS0 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL25A1Q9BXS0 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL25A1Q9BXS0 RPS2P1-201ENST00000434010 821 ntBASIC19.66■□□□□ 0.74
COL25A1Q9BXS0 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.66■□□□□ 0.74
COL25A1Q9BXS0 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.66■□□□□ 0.74
COL25A1Q9BXS0 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
COL25A1Q9BXS0 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.66■□□□□ 0.74
COL25A1Q9BXS0 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.66■□□□□ 0.74
COL25A1Q9BXS0 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL25A1Q9BXS0 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL25A1Q9BXS0 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL25A1Q9BXS0 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
COL25A1Q9BXS0 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL25A1Q9BXS0 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL25A1Q9BXS0 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL25A1Q9BXS0 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL25A1Q9BXS0 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.65■□□□□ 0.74
COL25A1Q9BXS0 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.65■□□□□ 0.74
COL25A1Q9BXS0 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL25A1Q9BXS0 AC190387.1-201ENST00000551683 408 ntBASIC19.65■□□□□ 0.74
COL25A1Q9BXS0 AF228730.6-201ENST00000641497 218 ntBASIC19.65■□□□□ 0.74
COL25A1Q9BXS0 AC084121.3-201ENST00000641716 218 ntBASIC19.65■□□□□ 0.74
COL25A1Q9BXS0 AC105233.6-201ENST00000642093 218 ntBASIC19.65■□□□□ 0.74
COL25A1Q9BXS0 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL25A1Q9BXS0 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL25A1Q9BXS0 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL25A1Q9BXS0 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.65■□□□□ 0.74
COL25A1Q9BXS0 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL25A1Q9BXS0 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
COL25A1Q9BXS0 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.64■□□□□ 0.74
COL25A1Q9BXS0 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL25A1Q9BXS0 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
COL25A1Q9BXS0 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.64■□□□□ 0.73
COL25A1Q9BXS0 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.64■□□□□ 0.73
COL25A1Q9BXS0 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL25A1Q9BXS0 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.64■□□□□ 0.73
COL25A1Q9BXS0 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.64■□□□□ 0.73
COL25A1Q9BXS0 AC008608.2-201ENST00000606089 416 ntBASIC19.64■□□□□ 0.73
COL25A1Q9BXS0 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.64■□□□□ 0.73
COL25A1Q9BXS0 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.64■□□□□ 0.73
COL25A1Q9BXS0 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL25A1Q9BXS0 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL25A1Q9BXS0 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.64■□□□□ 0.73
COL25A1Q9BXS0 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL25A1Q9BXS0 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL25A1Q9BXS0 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms