Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC27.83■■■□□ 2.05
SCAF11Q99590 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC27.83■■■□□ 2.05
SCAF11Q99590 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
SCAF11Q99590 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC27.83■■■□□ 2.05
SCAF11Q99590 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC27.83■■■□□ 2.05
SCAF11Q99590 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC27.83■■■□□ 2.05
SCAF11Q99590 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.04
SCAF11Q99590 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC27.83■■■□□ 2.04
SCAF11Q99590 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC27.83■■■□□ 2.04
SCAF11Q99590 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC27.83■■■□□ 2.04
SCAF11Q99590 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC27.83■■■□□ 2.04
SCAF11Q99590 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC27.83■■■□□ 2.04
SCAF11Q99590 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC27.83■■■□□ 2.04
SCAF11Q99590 GCSHP2-201ENST00000560971 527 ntBASIC27.83■■■□□ 2.04
SCAF11Q99590 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC27.83■■■□□ 2.04
SCAF11Q99590 CR769767.2-201ENST00000622735 460 ntBASIC27.83■■■□□ 2.04
SCAF11Q99590 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
SCAF11Q99590 KRT8P8-201ENST00000434750 1448 ntBASIC27.82■■■□□ 2.04
SCAF11Q99590 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
SCAF11Q99590 PHB2-202ENST00000440277 996 ntTSL 5 BASIC27.82■■■□□ 2.04
SCAF11Q99590 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC27.82■■■□□ 2.04
SCAF11Q99590 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
SCAF11Q99590 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC27.82■■■□□ 2.04
SCAF11Q99590 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
SCAF11Q99590 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
SCAF11Q99590 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC27.81■■■□□ 2.04
SCAF11Q99590 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC27.81■■■□□ 2.04
SCAF11Q99590 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
SCAF11Q99590 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
SCAF11Q99590 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
SCAF11Q99590 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC27.81■■■□□ 2.04
SCAF11Q99590 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
SCAF11Q99590 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC27.81■■■□□ 2.04
SCAF11Q99590 MIR3652-201ENST00000579335 131 ntBASIC27.81■■■□□ 2.04
SCAF11Q99590 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC27.81■■■□□ 2.04
SCAF11Q99590 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
SCAF11Q99590 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
SCAF11Q99590 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
SCAF11Q99590 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC27.81■■■□□ 2.04
SCAF11Q99590 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
SCAF11Q99590 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
SCAF11Q99590 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC27.81■■■□□ 2.04
SCAF11Q99590 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
SCAF11Q99590 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC27.8■■■□□ 2.04
SCAF11Q99590 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
SCAF11Q99590 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
SCAF11Q99590 CD37-204ENST00000535669 1674 ntTSL 2 BASIC27.8■■■□□ 2.04
SCAF11Q99590 AC004870.1-201ENST00000315132 882 ntBASIC27.8■■■□□ 2.04
SCAF11Q99590 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC27.8■■■□□ 2.04
SCAF11Q99590 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC27.8■■■□□ 2.04
SCAF11Q99590 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC27.8■■■□□ 2.04
SCAF11Q99590 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC27.8■■■□□ 2.04
SCAF11Q99590 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC27.8■■■□□ 2.04
SCAF11Q99590 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
SCAF11Q99590 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
SCAF11Q99590 AL512408.1-201ENST00000569378 2000 ntBASIC27.8■■■□□ 2.04
SCAF11Q99590 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC27.8■■■□□ 2.04
SCAF11Q99590 AL162377.1-201ENST00000618844 1793 ntBASIC27.79■■■□□ 2.04
SCAF11Q99590 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC27.79■■■□□ 2.04
SCAF11Q99590 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
SCAF11Q99590 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC27.79■■■□□ 2.04
SCAF11Q99590 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC27.79■■■□□ 2.04
SCAF11Q99590 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC27.79■■■□□ 2.04
SCAF11Q99590 AL160286.2-201ENST00000567150 934 ntBASIC27.79■■■□□ 2.04
SCAF11Q99590 FGF14-AS2-201ENST00000606448 1074 ntBASIC27.79■■■□□ 2.04
SCAF11Q99590 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC27.79■■■□□ 2.04
SCAF11Q99590 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC27.79■■■□□ 2.04
SCAF11Q99590 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
SCAF11Q99590 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC27.79■■■□□ 2.04
SCAF11Q99590 GABARAPL3-202ENST00000624044 1851 ntBASIC27.79■■■□□ 2.04
SCAF11Q99590 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC27.78■■■□□ 2.04
SCAF11Q99590 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC27.78■■■□□ 2.04
SCAF11Q99590 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
SCAF11Q99590 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
SCAF11Q99590 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC27.78■■■□□ 2.04
SCAF11Q99590 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
SCAF11Q99590 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
SCAF11Q99590 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC27.78■■■□□ 2.04
SCAF11Q99590 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC27.78■■■□□ 2.04
SCAF11Q99590 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC27.78■■■□□ 2.04
SCAF11Q99590 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC27.78■■■□□ 2.04
SCAF11Q99590 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC27.78■■■□□ 2.04
SCAF11Q99590 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC27.78■■■□□ 2.04
SCAF11Q99590 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC27.78■■■□□ 2.04
SCAF11Q99590 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
SCAF11Q99590 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC27.78■■■□□ 2.04
SCAF11Q99590 MOK-225ENST00000522867 1883 ntTSL 5 BASIC27.78■■■□□ 2.04
SCAF11Q99590 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
SCAF11Q99590 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
SCAF11Q99590 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
SCAF11Q99590 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
SCAF11Q99590 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC27.77■■■□□ 2.04
SCAF11Q99590 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
SCAF11Q99590 AL645929.1-201ENST00000420084 975 ntBASIC27.77■■■□□ 2.04
SCAF11Q99590 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC27.77■■■□□ 2.04
SCAF11Q99590 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
SCAF11Q99590 AC004263.2-201ENST00000617183 678 ntBASIC27.77■■■□□ 2.04
SCAF11Q99590 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC27.77■■■□□ 2.04
SCAF11Q99590 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
SCAF11Q99590 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms