Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PRICKLE1Q96MT3 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PRICKLE1Q96MT3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
PRICKLE1Q96MT3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20■□□□□ 0.79
PRICKLE1Q96MT3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20■□□□□ 0.79
PRICKLE1Q96MT3 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PRICKLE1Q96MT3 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PRICKLE1Q96MT3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
PRICKLE1Q96MT3 AC079598.2-202ENST00000546624 1451 ntBASIC19.99■□□□□ 0.79
PRICKLE1Q96MT3 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.99■□□□□ 0.79
PRICKLE1Q96MT3 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PRICKLE1Q96MT3 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.99■□□□□ 0.79
PRICKLE1Q96MT3 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PRICKLE1Q96MT3 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.99■□□□□ 0.79
PRICKLE1Q96MT3 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRICKLE1Q96MT3 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PRICKLE1Q96MT3 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.99■□□□□ 0.79
PRICKLE1Q96MT3 B3GAT3P1-201ENST00000471720 806 ntBASIC19.99■□□□□ 0.79
PRICKLE1Q96MT3 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.99■□□□□ 0.79
PRICKLE1Q96MT3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.99■□□□□ 0.79
PRICKLE1Q96MT3 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.99■□□□□ 0.79
PRICKLE1Q96MT3 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PRICKLE1Q96MT3 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PRICKLE1Q96MT3 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.99■□□□□ 0.79
PRICKLE1Q96MT3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRICKLE1Q96MT3 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.99■□□□□ 0.79
PRICKLE1Q96MT3 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
PRICKLE1Q96MT3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRICKLE1Q96MT3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.99■□□□□ 0.79
PRICKLE1Q96MT3 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRICKLE1Q96MT3 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PRICKLE1Q96MT3 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRICKLE1Q96MT3 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PRICKLE1Q96MT3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRICKLE1Q96MT3 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRICKLE1Q96MT3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRICKLE1Q96MT3 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
PRICKLE1Q96MT3 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.98■□□□□ 0.79
PRICKLE1Q96MT3 AC125437.2-201ENST00000625180 2167 ntBASIC19.98■□□□□ 0.79
PRICKLE1Q96MT3 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRICKLE1Q96MT3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PRICKLE1Q96MT3 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PRICKLE1Q96MT3 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRICKLE1Q96MT3 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PRICKLE1Q96MT3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
PRICKLE1Q96MT3 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.98■□□□□ 0.79
PRICKLE1Q96MT3 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.98■□□□□ 0.79
PRICKLE1Q96MT3 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRICKLE1Q96MT3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRICKLE1Q96MT3 AC011506.1-201ENST00000474329 610 ntBASIC19.98■□□□□ 0.79
PRICKLE1Q96MT3 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PRICKLE1Q96MT3 Z85996.1-201ENST00000494644 937 ntBASIC19.98■□□□□ 0.79
PRICKLE1Q96MT3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.98■□□□□ 0.79
PRICKLE1Q96MT3 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.98■□□□□ 0.79
PRICKLE1Q96MT3 AP000525.1-201ENST00000608286 694 ntBASIC19.98■□□□□ 0.79
PRICKLE1Q96MT3 MIR6786-201ENST00000616843 113 ntBASIC19.98■□□□□ 0.79
PRICKLE1Q96MT3 AC131212.4-201ENST00000623606 975 ntBASIC19.98■□□□□ 0.79
PRICKLE1Q96MT3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRICKLE1Q96MT3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PRICKLE1Q96MT3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PRICKLE1Q96MT3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRICKLE1Q96MT3 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.98■□□□□ 0.79
PRICKLE1Q96MT3 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRICKLE1Q96MT3 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRICKLE1Q96MT3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRICKLE1Q96MT3 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PRICKLE1Q96MT3 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.97■□□□□ 0.79
PRICKLE1Q96MT3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRICKLE1Q96MT3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.97■□□□□ 0.79
PRICKLE1Q96MT3 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.97■□□□□ 0.79
PRICKLE1Q96MT3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.97■□□□□ 0.79
PRICKLE1Q96MT3 RCC2P6-201ENST00000526625 1557 ntBASIC19.97■□□□□ 0.79
PRICKLE1Q96MT3 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRICKLE1Q96MT3 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRICKLE1Q96MT3 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PRICKLE1Q96MT3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.97■□□□□ 0.79
PRICKLE1Q96MT3 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.97■□□□□ 0.79
PRICKLE1Q96MT3 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.97■□□□□ 0.79
PRICKLE1Q96MT3 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.97■□□□□ 0.79
PRICKLE1Q96MT3 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
PRICKLE1Q96MT3 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRICKLE1Q96MT3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRICKLE1Q96MT3 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PRICKLE1Q96MT3 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRICKLE1Q96MT3 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRICKLE1Q96MT3 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
PRICKLE1Q96MT3 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRICKLE1Q96MT3 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRICKLE1Q96MT3 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRICKLE1Q96MT3 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRICKLE1Q96MT3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRICKLE1Q96MT3 AC087499.1-201ENST00000418141 1075 ntBASIC19.96■□□□□ 0.79
PRICKLE1Q96MT3 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
PRICKLE1Q96MT3 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.96■□□□□ 0.79
PRICKLE1Q96MT3 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRICKLE1Q96MT3 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PRICKLE1Q96MT3 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.96■□□□□ 0.79
PRICKLE1Q96MT3 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.96■□□□□ 0.79
PRICKLE1Q96MT3 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRICKLE1Q96MT3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms