Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.56■□□□□ 0.72
SHDQ96IW2 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.56■□□□□ 0.72
SHDQ96IW2 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.56■□□□□ 0.72
SHDQ96IW2 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.56■□□□□ 0.72
SHDQ96IW2 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.56■□□□□ 0.72
SHDQ96IW2 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.56■□□□□ 0.72
SHDQ96IW2 LINC01465-201ENST00000408887 1940 ntBASIC19.56■□□□□ 0.72
SHDQ96IW2 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHDQ96IW2 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.56■□□□□ 0.72
SHDQ96IW2 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
SHDQ96IW2 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHDQ96IW2 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.56■□□□□ 0.72
SHDQ96IW2 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.56■□□□□ 0.72
SHDQ96IW2 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
SHDQ96IW2 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHDQ96IW2 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHDQ96IW2 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SHDQ96IW2 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHDQ96IW2 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SHDQ96IW2 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.55■□□□□ 0.72
SHDQ96IW2 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHDQ96IW2 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHDQ96IW2 TSSC2-201ENST00000450217 709 ntBASIC19.55■□□□□ 0.72
SHDQ96IW2 BX276092.5-203ENST00000456199 560 ntBASIC19.55■□□□□ 0.72
SHDQ96IW2 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.55■□□□□ 0.72
SHDQ96IW2 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SHDQ96IW2 AL121672.3-201ENST00000608644 468 ntBASIC19.55■□□□□ 0.72
SHDQ96IW2 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHDQ96IW2 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHDQ96IW2 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHDQ96IW2 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHDQ96IW2 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHDQ96IW2 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SHDQ96IW2 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHDQ96IW2 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SHDQ96IW2 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHDQ96IW2 KRT8P11-201ENST00000409686 1436 ntBASIC19.54■□□□□ 0.72
SHDQ96IW2 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHDQ96IW2 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.54■□□□□ 0.72
SHDQ96IW2 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHDQ96IW2 KRT17P6-201ENST00000453795 1220 ntBASIC19.54■□□□□ 0.72
SHDQ96IW2 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.54■□□□□ 0.72
SHDQ96IW2 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.54■□□□□ 0.72
SHDQ96IW2 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
SHDQ96IW2 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.54■□□□□ 0.72
SHDQ96IW2 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SHDQ96IW2 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.54■□□□□ 0.72
SHDQ96IW2 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.54■□□□□ 0.72
SHDQ96IW2 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHDQ96IW2 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SHDQ96IW2 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SHDQ96IW2 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SHDQ96IW2 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHDQ96IW2 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHDQ96IW2 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHDQ96IW2 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.53■□□□□ 0.72
SHDQ96IW2 AL845331.1-201ENST00000424978 1190 ntBASIC19.53■□□□□ 0.72
SHDQ96IW2 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.53■□□□□ 0.72
SHDQ96IW2 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.53■□□□□ 0.72
SHDQ96IW2 CR769767.2-201ENST00000622735 460 ntBASIC19.53■□□□□ 0.72
SHDQ96IW2 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.53■□□□□ 0.72
SHDQ96IW2 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHDQ96IW2 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHDQ96IW2 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SHDQ96IW2 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHDQ96IW2 SMG8-203ENST00000578922 2178 ntBASIC19.53■□□□□ 0.72
SHDQ96IW2 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHDQ96IW2 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.53■□□□□ 0.72
SHDQ96IW2 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
SHDQ96IW2 AL117328.2-201ENST00000624617 1940 ntBASIC19.53■□□□□ 0.72
SHDQ96IW2 BX119927.1-201ENST00000636596 1552 ntBASIC19.53■□□□□ 0.72
SHDQ96IW2 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
SHDQ96IW2 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SHDQ96IW2 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.52■□□□□ 0.72
SHDQ96IW2 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
SHDQ96IW2 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SHDQ96IW2 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.52■□□□□ 0.72
SHDQ96IW2 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SHDQ96IW2 SPDYE13P-201ENST00000445314 798 ntBASIC19.52■□□□□ 0.72
SHDQ96IW2 RASA4DP-201ENST00000460726 1199 ntBASIC19.52■□□□□ 0.72
SHDQ96IW2 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.52■□□□□ 0.72
SHDQ96IW2 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
SHDQ96IW2 AC011498.5-201ENST00000592027 486 ntBASIC19.52■□□□□ 0.72
SHDQ96IW2 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SHDQ96IW2 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SHDQ96IW2 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SHDQ96IW2 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.52■□□□□ 0.72
SHDQ96IW2 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SHDQ96IW2 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.52■□□□□ 0.72
SHDQ96IW2 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.52■□□□□ 0.71
SHDQ96IW2 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SHDQ96IW2 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SHDQ96IW2 KRT8P10-201ENST00000450021 1447 ntBASIC19.51■□□□□ 0.71
SHDQ96IW2 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.51■□□□□ 0.71
SHDQ96IW2 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SHDQ96IW2 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SHDQ96IW2 AC079834.2-201ENST00000609776 1949 ntBASIC19.51■□□□□ 0.71
SHDQ96IW2 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.51■□□□□ 0.71
SHDQ96IW2 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SHDQ96IW2 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms