Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.27■□□□□ 0.2
RTN4IP1Q8WWV3 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.27■□□□□ 0.2
RTN4IP1Q8WWV3 AC092118.2-201ENST00000613495 667 ntBASIC16.27■□□□□ 0.2
RTN4IP1Q8WWV3 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.27■□□□□ 0.2
RTN4IP1Q8WWV3 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.27■□□□□ 0.2
RTN4IP1Q8WWV3 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RTN4IP1Q8WWV3 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.27■□□□□ 0.2
RTN4IP1Q8WWV3 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.27■□□□□ 0.19
RTN4IP1Q8WWV3 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RTN4IP1Q8WWV3 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
RTN4IP1Q8WWV3 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RTN4IP1Q8WWV3 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RTN4IP1Q8WWV3 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RTN4IP1Q8WWV3 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.27■□□□□ 0.19
RTN4IP1Q8WWV3 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
RTN4IP1Q8WWV3 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RTN4IP1Q8WWV3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RTN4IP1Q8WWV3 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RTN4IP1Q8WWV3 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RTN4IP1Q8WWV3 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RTN4IP1Q8WWV3 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RTN4IP1Q8WWV3 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.26■□□□□ 0.19
RTN4IP1Q8WWV3 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.26■□□□□ 0.19
RTN4IP1Q8WWV3 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RTN4IP1Q8WWV3 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.26■□□□□ 0.19
RTN4IP1Q8WWV3 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RTN4IP1Q8WWV3 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RTN4IP1Q8WWV3 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
RTN4IP1Q8WWV3 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RTN4IP1Q8WWV3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.26■□□□□ 0.19
RTN4IP1Q8WWV3 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RTN4IP1Q8WWV3 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
RTN4IP1Q8WWV3 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.26■□□□□ 0.19
RTN4IP1Q8WWV3 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RTN4IP1Q8WWV3 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
RTN4IP1Q8WWV3 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RTN4IP1Q8WWV3 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RTN4IP1Q8WWV3 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.26■□□□□ 0.19
RTN4IP1Q8WWV3 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.26■□□□□ 0.19
RTN4IP1Q8WWV3 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
RTN4IP1Q8WWV3 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RTN4IP1Q8WWV3 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RTN4IP1Q8WWV3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RTN4IP1Q8WWV3 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
RTN4IP1Q8WWV3 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
RTN4IP1Q8WWV3 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RTN4IP1Q8WWV3 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RTN4IP1Q8WWV3 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RTN4IP1Q8WWV3 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RTN4IP1Q8WWV3 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
RTN4IP1Q8WWV3 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.26■□□□□ 0.19
RTN4IP1Q8WWV3 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.26■□□□□ 0.19
RTN4IP1Q8WWV3 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RTN4IP1Q8WWV3 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RTN4IP1Q8WWV3 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RTN4IP1Q8WWV3 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.25■□□□□ 0.19
RTN4IP1Q8WWV3 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RTN4IP1Q8WWV3 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RTN4IP1Q8WWV3 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RTN4IP1Q8WWV3 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RTN4IP1Q8WWV3 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RTN4IP1Q8WWV3 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RTN4IP1Q8WWV3 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RTN4IP1Q8WWV3 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RTN4IP1Q8WWV3 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.25■□□□□ 0.19
RTN4IP1Q8WWV3 MIR4758-201ENST00000577688 71 ntBASIC16.25■□□□□ 0.19
RTN4IP1Q8WWV3 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.25■□□□□ 0.19
RTN4IP1Q8WWV3 AL109923.1-201ENST00000618799 583 ntBASIC16.25■□□□□ 0.19
RTN4IP1Q8WWV3 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
RTN4IP1Q8WWV3 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.25■□□□□ 0.19
RTN4IP1Q8WWV3 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RTN4IP1Q8WWV3 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RTN4IP1Q8WWV3 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RTN4IP1Q8WWV3 AC026471.1-201ENST00000564629 3026 ntBASIC16.25■□□□□ 0.19
RTN4IP1Q8WWV3 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.25■□□□□ 0.19
RTN4IP1Q8WWV3 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.25■□□□□ 0.19
RTN4IP1Q8WWV3 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RTN4IP1Q8WWV3 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RTN4IP1Q8WWV3 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTN4IP1Q8WWV3 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTN4IP1Q8WWV3 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTN4IP1Q8WWV3 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTN4IP1Q8WWV3 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RTN4IP1Q8WWV3 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.24■□□□□ 0.19
RTN4IP1Q8WWV3 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTN4IP1Q8WWV3 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RTN4IP1Q8WWV3 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.24■□□□□ 0.19
RTN4IP1Q8WWV3 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
RTN4IP1Q8WWV3 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTN4IP1Q8WWV3 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RTN4IP1Q8WWV3 CROCCP3-202ENST00000420820 1947 ntBASIC16.24■□□□□ 0.19
RTN4IP1Q8WWV3 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RTN4IP1Q8WWV3 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTN4IP1Q8WWV3 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTN4IP1Q8WWV3 HLA-G-202ENST00000376815 851 ntBASIC16.24■□□□□ 0.19
RTN4IP1Q8WWV3 HLA-G-203ENST00000376818 1127 ntBASIC16.24■□□□□ 0.19
RTN4IP1Q8WWV3 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
RTN4IP1Q8WWV3 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.24■□□□□ 0.19
RTN4IP1Q8WWV3 DUSP5P2-201ENST00000426873 1033 ntBASIC16.24■□□□□ 0.19
RTN4IP1Q8WWV3 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms