Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC23.59■■□□□ 1.37
SNED1Q8TER0 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SNED1Q8TER0 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SNED1Q8TER0 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SNED1Q8TER0 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SNED1Q8TER0 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC23.59■■□□□ 1.37
SNED1Q8TER0 FDX1P1-201ENST00000449115 551 ntBASIC23.59■■□□□ 1.37
SNED1Q8TER0 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SNED1Q8TER0 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SNED1Q8TER0 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC23.59■■□□□ 1.37
SNED1Q8TER0 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
SNED1Q8TER0 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC23.59■■□□□ 1.37
SNED1Q8TER0 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SNED1Q8TER0 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
SNED1Q8TER0 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
SNED1Q8TER0 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SNED1Q8TER0 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
SNED1Q8TER0 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
SNED1Q8TER0 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
SNED1Q8TER0 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SNED1Q8TER0 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC23.59■■□□□ 1.37
SNED1Q8TER0 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
SNED1Q8TER0 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SNED1Q8TER0 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SNED1Q8TER0 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SNED1Q8TER0 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC23.59■■□□□ 1.37
SNED1Q8TER0 FGF14-AS2-201ENST00000606448 1074 ntBASIC23.59■■□□□ 1.37
SNED1Q8TER0 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC23.59■■□□□ 1.37
SNED1Q8TER0 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC23.58■■□□□ 1.37
SNED1Q8TER0 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
SNED1Q8TER0 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SNED1Q8TER0 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SNED1Q8TER0 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC23.58■■□□□ 1.37
SNED1Q8TER0 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SNED1Q8TER0 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
SNED1Q8TER0 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
SNED1Q8TER0 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.36
SNED1Q8TER0 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC23.58■■□□□ 1.36
SNED1Q8TER0 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC23.58■■□□□ 1.36
SNED1Q8TER0 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC23.58■■□□□ 1.36
SNED1Q8TER0 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
SNED1Q8TER0 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC23.58■■□□□ 1.36
SNED1Q8TER0 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC23.58■■□□□ 1.36
SNED1Q8TER0 MIR3180-1-201ENST00000580374 94 ntBASIC23.58■■□□□ 1.36
SNED1Q8TER0 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC23.58■■□□□ 1.36
SNED1Q8TER0 MIR3180-3-201ENST00000584616 94 ntBASIC23.58■■□□□ 1.36
SNED1Q8TER0 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC23.58■■□□□ 1.36
SNED1Q8TER0 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
SNED1Q8TER0 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC23.57■■□□□ 1.36
SNED1Q8TER0 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SNED1Q8TER0 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC23.57■■□□□ 1.36
SNED1Q8TER0 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC23.57■■□□□ 1.36
SNED1Q8TER0 ME2-216ENST00000639850 2331 ntTSL 5 BASIC23.57■■□□□ 1.36
SNED1Q8TER0 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC23.57■■□□□ 1.36
SNED1Q8TER0 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SNED1Q8TER0 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SNED1Q8TER0 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC23.57■■□□□ 1.36
SNED1Q8TER0 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC23.57■■□□□ 1.36
SNED1Q8TER0 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC23.57■■□□□ 1.36
SNED1Q8TER0 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
SNED1Q8TER0 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC23.57■■□□□ 1.36
SNED1Q8TER0 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SNED1Q8TER0 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SNED1Q8TER0 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC23.57■■□□□ 1.36
SNED1Q8TER0 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SNED1Q8TER0 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SNED1Q8TER0 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC23.56■■□□□ 1.36
SNED1Q8TER0 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC23.56■■□□□ 1.36
SNED1Q8TER0 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
SNED1Q8TER0 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC23.56■■□□□ 1.36
SNED1Q8TER0 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SNED1Q8TER0 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
SNED1Q8TER0 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC23.56■■□□□ 1.36
SNED1Q8TER0 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC23.56■■□□□ 1.36
SNED1Q8TER0 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC23.56■■□□□ 1.36
SNED1Q8TER0 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SNED1Q8TER0 AL645929.1-201ENST00000420084 975 ntBASIC23.56■■□□□ 1.36
SNED1Q8TER0 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
SNED1Q8TER0 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC23.56■■□□□ 1.36
SNED1Q8TER0 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC23.56■■□□□ 1.36
SNED1Q8TER0 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC23.56■■□□□ 1.36
SNED1Q8TER0 AC092119.3-201ENST00000612618 583 ntBASIC23.56■■□□□ 1.36
SNED1Q8TER0 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SNED1Q8TER0 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC23.55■■□□□ 1.36
SNED1Q8TER0 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SNED1Q8TER0 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SNED1Q8TER0 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SNED1Q8TER0 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SNED1Q8TER0 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SNED1Q8TER0 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC23.55■■□□□ 1.36
SNED1Q8TER0 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC23.55■■□□□ 1.36
SNED1Q8TER0 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC23.55■■□□□ 1.36
SNED1Q8TER0 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC23.55■■□□□ 1.36
SNED1Q8TER0 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC23.55■■□□□ 1.36
SNED1Q8TER0 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC23.55■■□□□ 1.36
SNED1Q8TER0 CR769767.2-201ENST00000622735 460 ntBASIC23.55■■□□□ 1.36
SNED1Q8TER0 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC23.55■■□□□ 1.36
SNED1Q8TER0 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SNED1Q8TER0 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SNED1Q8TER0 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms