Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.87■□□□□ 0.77
PAF1Q8N7H5 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PAF1Q8N7H5 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.87■□□□□ 0.77
PAF1Q8N7H5 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PAF1Q8N7H5 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
PAF1Q8N7H5 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PAF1Q8N7H5 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PAF1Q8N7H5 TFP1-202ENST00000475455 1573 ntBASIC19.87■□□□□ 0.77
PAF1Q8N7H5 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
PAF1Q8N7H5 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.86■□□□□ 0.77
PAF1Q8N7H5 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
PAF1Q8N7H5 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PAF1Q8N7H5 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
PAF1Q8N7H5 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PAF1Q8N7H5 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.86■□□□□ 0.77
PAF1Q8N7H5 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.86■□□□□ 0.77
PAF1Q8N7H5 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PAF1Q8N7H5 AC073130.3-201ENST00000624389 2278 ntBASIC19.86■□□□□ 0.77
PAF1Q8N7H5 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
PAF1Q8N7H5 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
PAF1Q8N7H5 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PAF1Q8N7H5 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PAF1Q8N7H5 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PAF1Q8N7H5 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.86■□□□□ 0.77
PAF1Q8N7H5 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.86■□□□□ 0.77
PAF1Q8N7H5 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PAF1Q8N7H5 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PAF1Q8N7H5 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.86■□□□□ 0.77
PAF1Q8N7H5 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
PAF1Q8N7H5 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.86■□□□□ 0.77
PAF1Q8N7H5 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.86■□□□□ 0.77
PAF1Q8N7H5 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.86■□□□□ 0.77
PAF1Q8N7H5 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PAF1Q8N7H5 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.86■□□□□ 0.77
PAF1Q8N7H5 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.86■□□□□ 0.77
PAF1Q8N7H5 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.86■□□□□ 0.77
PAF1Q8N7H5 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
PAF1Q8N7H5 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PAF1Q8N7H5 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.86■□□□□ 0.77
PAF1Q8N7H5 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PAF1Q8N7H5 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.86■□□□□ 0.77
PAF1Q8N7H5 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PAF1Q8N7H5 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.86■□□□□ 0.77
PAF1Q8N7H5 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PAF1Q8N7H5 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.85■□□□□ 0.77
PAF1Q8N7H5 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
PAF1Q8N7H5 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
PAF1Q8N7H5 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PAF1Q8N7H5 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PAF1Q8N7H5 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PAF1Q8N7H5 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PAF1Q8N7H5 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PAF1Q8N7H5 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PAF1Q8N7H5 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
PAF1Q8N7H5 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PAF1Q8N7H5 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.85■□□□□ 0.77
PAF1Q8N7H5 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.85■□□□□ 0.77
PAF1Q8N7H5 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.85■□□□□ 0.77
PAF1Q8N7H5 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.85■□□□□ 0.77
PAF1Q8N7H5 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.85■□□□□ 0.77
PAF1Q8N7H5 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PAF1Q8N7H5 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PAF1Q8N7H5 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.85■□□□□ 0.77
PAF1Q8N7H5 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PAF1Q8N7H5 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PAF1Q8N7H5 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PAF1Q8N7H5 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PAF1Q8N7H5 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PAF1Q8N7H5 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PAF1Q8N7H5 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
PAF1Q8N7H5 TCF3P1-201ENST00000423021 1937 ntBASIC19.84■□□□□ 0.77
PAF1Q8N7H5 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.84■□□□□ 0.77
PAF1Q8N7H5 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PAF1Q8N7H5 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
PAF1Q8N7H5 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PAF1Q8N7H5 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PAF1Q8N7H5 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PAF1Q8N7H5 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PAF1Q8N7H5 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PAF1Q8N7H5 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.84■□□□□ 0.77
PAF1Q8N7H5 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.84■□□□□ 0.77
PAF1Q8N7H5 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PAF1Q8N7H5 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
PAF1Q8N7H5 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.84■□□□□ 0.77
PAF1Q8N7H5 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PAF1Q8N7H5 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PAF1Q8N7H5 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PAF1Q8N7H5 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PAF1Q8N7H5 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PAF1Q8N7H5 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
PAF1Q8N7H5 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PAF1Q8N7H5 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PAF1Q8N7H5 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.84■□□□□ 0.77
PAF1Q8N7H5 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
PAF1Q8N7H5 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
PAF1Q8N7H5 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.83■□□□□ 0.77
PAF1Q8N7H5 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PAF1Q8N7H5 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
PAF1Q8N7H5 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PAF1Q8N7H5 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms