Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ARHGEF39Q8N4T4 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.3■□□□□ 0.52
ARHGEF39Q8N4T4 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.3■□□□□ 0.52
ARHGEF39Q8N4T4 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
ARHGEF39Q8N4T4 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ARHGEF39Q8N4T4 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ARHGEF39Q8N4T4 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
ARHGEF39Q8N4T4 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ARHGEF39Q8N4T4 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.29■□□□□ 0.52
ARHGEF39Q8N4T4 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ARHGEF39Q8N4T4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ARHGEF39Q8N4T4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.29■□□□□ 0.52
ARHGEF39Q8N4T4 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ARHGEF39Q8N4T4 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.29■□□□□ 0.52
ARHGEF39Q8N4T4 UNC93B2-201ENST00000285383 730 ntBASIC18.29■□□□□ 0.52
ARHGEF39Q8N4T4 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
ARHGEF39Q8N4T4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ARHGEF39Q8N4T4 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ARHGEF39Q8N4T4 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ARHGEF39Q8N4T4 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
ARHGEF39Q8N4T4 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.29■□□□□ 0.52
ARHGEF39Q8N4T4 AP000525.1-201ENST00000608286 694 ntBASIC18.29■□□□□ 0.52
ARHGEF39Q8N4T4 AC011298.2-201ENST00000617989 482 ntBASIC18.29■□□□□ 0.52
ARHGEF39Q8N4T4 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.29■□□□□ 0.52
ARHGEF39Q8N4T4 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.29■□□□□ 0.52
ARHGEF39Q8N4T4 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
ARHGEF39Q8N4T4 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.29■□□□□ 0.52
ARHGEF39Q8N4T4 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
ARHGEF39Q8N4T4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ARHGEF39Q8N4T4 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ARHGEF39Q8N4T4 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.28■□□□□ 0.52
ARHGEF39Q8N4T4 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ARHGEF39Q8N4T4 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
ARHGEF39Q8N4T4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ARHGEF39Q8N4T4 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ARHGEF39Q8N4T4 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.28■□□□□ 0.52
ARHGEF39Q8N4T4 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.28■□□□□ 0.52
ARHGEF39Q8N4T4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ARHGEF39Q8N4T4 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ARHGEF39Q8N4T4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.28■□□□□ 0.52
ARHGEF39Q8N4T4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.28■□□□□ 0.52
ARHGEF39Q8N4T4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.28■□□□□ 0.52
ARHGEF39Q8N4T4 FITM1-202ENST00000559294 800 ntBASIC18.28■□□□□ 0.52
ARHGEF39Q8N4T4 AC073912.3-201ENST00000624414 853 ntBASIC18.28■□□□□ 0.52
ARHGEF39Q8N4T4 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
ARHGEF39Q8N4T4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.28■□□□□ 0.52
ARHGEF39Q8N4T4 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ARHGEF39Q8N4T4 AC096733.2-201ENST00000609937 1394 ntBASIC18.28■□□□□ 0.52
ARHGEF39Q8N4T4 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ARHGEF39Q8N4T4 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.28■□□□□ 0.52
ARHGEF39Q8N4T4 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.28■□□□□ 0.52
ARHGEF39Q8N4T4 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ARHGEF39Q8N4T4 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.27■□□□□ 0.52
ARHGEF39Q8N4T4 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.27■□□□□ 0.52
ARHGEF39Q8N4T4 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
ARHGEF39Q8N4T4 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
ARHGEF39Q8N4T4 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ARHGEF39Q8N4T4 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.52
ARHGEF39Q8N4T4 KRT8P9-201ENST00000558927 1449 ntBASIC18.27■□□□□ 0.52
ARHGEF39Q8N4T4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ARHGEF39Q8N4T4 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ARHGEF39Q8N4T4 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ARHGEF39Q8N4T4 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.27■□□□□ 0.52
ARHGEF39Q8N4T4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.27■□□□□ 0.52
ARHGEF39Q8N4T4 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ARHGEF39Q8N4T4 AP005242.2-201ENST00000580065 1175 ntBASIC18.27■□□□□ 0.52
ARHGEF39Q8N4T4 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ARHGEF39Q8N4T4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
ARHGEF39Q8N4T4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ARHGEF39Q8N4T4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
ARHGEF39Q8N4T4 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ARHGEF39Q8N4T4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ARHGEF39Q8N4T4 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ARHGEF39Q8N4T4 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ARHGEF39Q8N4T4 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ARHGEF39Q8N4T4 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ARHGEF39Q8N4T4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.26■□□□□ 0.51
ARHGEF39Q8N4T4 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ARHGEF39Q8N4T4 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.26■□□□□ 0.51
ARHGEF39Q8N4T4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.26■□□□□ 0.51
ARHGEF39Q8N4T4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.26■□□□□ 0.51
ARHGEF39Q8N4T4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ARHGEF39Q8N4T4 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
ARHGEF39Q8N4T4 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.26■□□□□ 0.51
ARHGEF39Q8N4T4 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ARHGEF39Q8N4T4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.26■□□□□ 0.51
ARHGEF39Q8N4T4 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ARHGEF39Q8N4T4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ARHGEF39Q8N4T4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.25■□□□□ 0.51
ARHGEF39Q8N4T4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.25■□□□□ 0.51
ARHGEF39Q8N4T4 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.25■□□□□ 0.51
ARHGEF39Q8N4T4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.25■□□□□ 0.51
ARHGEF39Q8N4T4 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ARHGEF39Q8N4T4 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ARHGEF39Q8N4T4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
ARHGEF39Q8N4T4 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.25■□□□□ 0.51
ARHGEF39Q8N4T4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
ARHGEF39Q8N4T4 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ARHGEF39Q8N4T4 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ARHGEF39Q8N4T4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms