Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
SMC5Q8IY18 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC23.97■■□□□ 1.43
SMC5Q8IY18 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC23.97■■□□□ 1.43
SMC5Q8IY18 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SMC5Q8IY18 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SMC5Q8IY18 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC23.97■■□□□ 1.43
SMC5Q8IY18 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
SMC5Q8IY18 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
SMC5Q8IY18 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SMC5Q8IY18 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SMC5Q8IY18 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
SMC5Q8IY18 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SMC5Q8IY18 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
SMC5Q8IY18 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC23.97■■□□□ 1.43
SMC5Q8IY18 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SMC5Q8IY18 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
SMC5Q8IY18 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC23.97■■□□□ 1.43
SMC5Q8IY18 AP003097.1-201ENST00000530657 1135 ntBASIC23.97■■□□□ 1.43
SMC5Q8IY18 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC23.97■■□□□ 1.43
SMC5Q8IY18 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SMC5Q8IY18 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SMC5Q8IY18 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC23.97■■□□□ 1.43
SMC5Q8IY18 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
SMC5Q8IY18 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
SMC5Q8IY18 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC23.96■■□□□ 1.43
SMC5Q8IY18 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
SMC5Q8IY18 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC23.96■■□□□ 1.43
SMC5Q8IY18 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SMC5Q8IY18 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC23.96■■□□□ 1.43
SMC5Q8IY18 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC23.96■■□□□ 1.43
SMC5Q8IY18 AC233263.1-201ENST00000578059 224 ntBASIC23.96■■□□□ 1.43
SMC5Q8IY18 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC23.96■■□□□ 1.43
SMC5Q8IY18 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SMC5Q8IY18 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC23.96■■□□□ 1.43
SMC5Q8IY18 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SMC5Q8IY18 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
SMC5Q8IY18 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC23.96■■□□□ 1.43
SMC5Q8IY18 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SMC5Q8IY18 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.43
SMC5Q8IY18 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SMC5Q8IY18 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
SMC5Q8IY18 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC23.95■■□□□ 1.42
SMC5Q8IY18 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC23.95■■□□□ 1.42
SMC5Q8IY18 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SMC5Q8IY18 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
SMC5Q8IY18 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SMC5Q8IY18 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SMC5Q8IY18 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SMC5Q8IY18 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC23.95■■□□□ 1.42
SMC5Q8IY18 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SMC5Q8IY18 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC23.95■■□□□ 1.42
SMC5Q8IY18 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SMC5Q8IY18 AC069544.1-201ENST00000609399 999 ntBASIC23.95■■□□□ 1.42
SMC5Q8IY18 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
SMC5Q8IY18 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SMC5Q8IY18 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
SMC5Q8IY18 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC23.95■■□□□ 1.42
SMC5Q8IY18 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC23.95■■□□□ 1.42
SMC5Q8IY18 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SMC5Q8IY18 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC23.94■■□□□ 1.42
SMC5Q8IY18 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SMC5Q8IY18 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SMC5Q8IY18 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
SMC5Q8IY18 NBPF21P-201ENST00000425093 1451 ntBASIC23.94■■□□□ 1.42
SMC5Q8IY18 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SMC5Q8IY18 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC23.94■■□□□ 1.42
SMC5Q8IY18 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SMC5Q8IY18 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SMC5Q8IY18 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC23.94■■□□□ 1.42
SMC5Q8IY18 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
SMC5Q8IY18 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SMC5Q8IY18 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
SMC5Q8IY18 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC23.94■■□□□ 1.42
SMC5Q8IY18 AC026366.1-201ENST00000488803 879 ntBASIC23.94■■□□□ 1.42
SMC5Q8IY18 C1QL1P1-201ENST00000568105 661 ntBASIC23.94■■□□□ 1.42
SMC5Q8IY18 HLA-A-209ENST00000638375 975 ntBASIC23.94■■□□□ 1.42
SMC5Q8IY18 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC23.94■■□□□ 1.42
SMC5Q8IY18 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
SMC5Q8IY18 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SMC5Q8IY18 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SMC5Q8IY18 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SMC5Q8IY18 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SMC5Q8IY18 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
SMC5Q8IY18 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SMC5Q8IY18 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
SMC5Q8IY18 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SMC5Q8IY18 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
SMC5Q8IY18 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SMC5Q8IY18 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SMC5Q8IY18 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
SMC5Q8IY18 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
SMC5Q8IY18 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC23.93■■□□□ 1.42
SMC5Q8IY18 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SMC5Q8IY18 RNA5SP413-201ENST00000516373 109 ntBASIC23.93■■□□□ 1.42
SMC5Q8IY18 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC23.93■■□□□ 1.42
SMC5Q8IY18 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC23.93■■□□□ 1.42
SMC5Q8IY18 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SMC5Q8IY18 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC23.93■■□□□ 1.42
SMC5Q8IY18 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SMC5Q8IY18 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms