Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
VPS13BQ7Z7G8 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC11.97□□□□□ -0.49
VPS13BQ7Z7G8 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
VPS13BQ7Z7G8 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
VPS13BQ7Z7G8 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC11.97□□□□□ -0.49
VPS13BQ7Z7G8 MOK-225ENST00000522867 1883 ntTSL 5 BASIC11.97□□□□□ -0.49
VPS13BQ7Z7G8 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
VPS13BQ7Z7G8 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
VPS13BQ7Z7G8 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VPS13BQ7Z7G8 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC11.97□□□□□ -0.49
VPS13BQ7Z7G8 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC11.97□□□□□ -0.49
VPS13BQ7Z7G8 AL023973.1-201ENST00000624619 620 ntBASIC11.97□□□□□ -0.49
VPS13BQ7Z7G8 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
VPS13BQ7Z7G8 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VPS13BQ7Z7G8 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
VPS13BQ7Z7G8 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VPS13BQ7Z7G8 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
VPS13BQ7Z7G8 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VPS13BQ7Z7G8 ANKRD20A18P-201ENST00000359341 492 ntBASIC11.97□□□□□ -0.49
VPS13BQ7Z7G8 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VPS13BQ7Z7G8 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC11.97□□□□□ -0.49
VPS13BQ7Z7G8 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VPS13BQ7Z7G8 AL136038.3-201ENST00000561909 1096 ntBASIC11.97□□□□□ -0.49
VPS13BQ7Z7G8 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
VPS13BQ7Z7G8 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VPS13BQ7Z7G8 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
VPS13BQ7Z7G8 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VPS13BQ7Z7G8 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
VPS13BQ7Z7G8 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
VPS13BQ7Z7G8 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC11.96□□□□□ -0.49
VPS13BQ7Z7G8 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC11.96□□□□□ -0.49
VPS13BQ7Z7G8 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
VPS13BQ7Z7G8 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VPS13BQ7Z7G8 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
VPS13BQ7Z7G8 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC11.96□□□□□ -0.49
VPS13BQ7Z7G8 AP003041.3-201ENST00000527151 707 ntBASIC11.96□□□□□ -0.49
VPS13BQ7Z7G8 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC11.96□□□□□ -0.49
VPS13BQ7Z7G8 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC11.96□□□□□ -0.49
VPS13BQ7Z7G8 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC11.96□□□□□ -0.49
VPS13BQ7Z7G8 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VPS13BQ7Z7G8 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VPS13BQ7Z7G8 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VPS13BQ7Z7G8 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC11.96□□□□□ -0.49
VPS13BQ7Z7G8 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
VPS13BQ7Z7G8 LY6E-213ENST00000522528 606 ntTSL 3 BASIC11.96□□□□□ -0.49
VPS13BQ7Z7G8 AL353719.1-201ENST00000566847 864 ntBASIC11.96□□□□□ -0.49
VPS13BQ7Z7G8 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC11.96□□□□□ -0.49
VPS13BQ7Z7G8 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
VPS13BQ7Z7G8 AL157384.1-201ENST00000445995 2473 ntBASIC11.96□□□□□ -0.49
VPS13BQ7Z7G8 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
VPS13BQ7Z7G8 AP000593.1-201ENST00000393668 712 ntBASIC11.96□□□□□ -0.5
VPS13BQ7Z7G8 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
VPS13BQ7Z7G8 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC11.96□□□□□ -0.5
VPS13BQ7Z7G8 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
VPS13BQ7Z7G8 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
VPS13BQ7Z7G8 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
VPS13BQ7Z7G8 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13BQ7Z7G8 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13BQ7Z7G8 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
VPS13BQ7Z7G8 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC11.95□□□□□ -0.5
VPS13BQ7Z7G8 AP002469.2-201ENST00000531724 424 ntBASIC11.95□□□□□ -0.5
VPS13BQ7Z7G8 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13BQ7Z7G8 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
VPS13BQ7Z7G8 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13BQ7Z7G8 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13BQ7Z7G8 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13BQ7Z7G8 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13BQ7Z7G8 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13BQ7Z7G8 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
VPS13BQ7Z7G8 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC11.95□□□□□ -0.5
VPS13BQ7Z7G8 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13BQ7Z7G8 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13BQ7Z7G8 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
VPS13BQ7Z7G8 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13BQ7Z7G8 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC11.95□□□□□ -0.5
VPS13BQ7Z7G8 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
VPS13BQ7Z7G8 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13BQ7Z7G8 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
VPS13BQ7Z7G8 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC11.95□□□□□ -0.5
VPS13BQ7Z7G8 LINC01311-201ENST00000565162 1445 ntBASIC11.95□□□□□ -0.5
VPS13BQ7Z7G8 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13BQ7Z7G8 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
VPS13BQ7Z7G8 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13BQ7Z7G8 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13BQ7Z7G8 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC11.95□□□□□ -0.5
VPS13BQ7Z7G8 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13BQ7Z7G8 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC11.95□□□□□ -0.5
VPS13BQ7Z7G8 MIR3652-201ENST00000579335 131 ntBASIC11.95□□□□□ -0.5
VPS13BQ7Z7G8 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
VPS13BQ7Z7G8 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13BQ7Z7G8 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
VPS13BQ7Z7G8 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC11.95□□□□□ -0.5
VPS13BQ7Z7G8 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13BQ7Z7G8 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13BQ7Z7G8 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13BQ7Z7G8 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC11.95□□□□□ -0.5
VPS13BQ7Z7G8 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13BQ7Z7G8 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
VPS13BQ7Z7G8 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
VPS13BQ7Z7G8 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms