Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.85■□□□□ 0.93
CNKSR3Q6P9H4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.85■□□□□ 0.93
CNKSR3Q6P9H4 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.85■□□□□ 0.93
CNKSR3Q6P9H4 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.85■□□□□ 0.93
CNKSR3Q6P9H4 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNKSR3Q6P9H4 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CNKSR3Q6P9H4 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNKSR3Q6P9H4 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.85■□□□□ 0.93
CNKSR3Q6P9H4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CNKSR3Q6P9H4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.84■□□□□ 0.93
CNKSR3Q6P9H4 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNKSR3Q6P9H4 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNKSR3Q6P9H4 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNKSR3Q6P9H4 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
CNKSR3Q6P9H4 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNKSR3Q6P9H4 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.84■□□□□ 0.93
CNKSR3Q6P9H4 SPDYE13P-201ENST00000445314 798 ntBASIC20.84■□□□□ 0.93
CNKSR3Q6P9H4 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.84■□□□□ 0.93
CNKSR3Q6P9H4 MIR4674-201ENST00000582457 87 ntBASIC20.84■□□□□ 0.93
CNKSR3Q6P9H4 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CNKSR3Q6P9H4 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNKSR3Q6P9H4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CNKSR3Q6P9H4 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNKSR3Q6P9H4 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CNKSR3Q6P9H4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNKSR3Q6P9H4 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.83■□□□□ 0.93
CNKSR3Q6P9H4 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNKSR3Q6P9H4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNKSR3Q6P9H4 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CNKSR3Q6P9H4 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CNKSR3Q6P9H4 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNKSR3Q6P9H4 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNKSR3Q6P9H4 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNKSR3Q6P9H4 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNKSR3Q6P9H4 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.83■□□□□ 0.93
CNKSR3Q6P9H4 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
CNKSR3Q6P9H4 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.83■□□□□ 0.93
CNKSR3Q6P9H4 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNKSR3Q6P9H4 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CNKSR3Q6P9H4 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.83■□□□□ 0.93
CNKSR3Q6P9H4 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.83■□□□□ 0.93
CNKSR3Q6P9H4 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CNKSR3Q6P9H4 NPAP1P7-201ENST00000613027 823 ntBASIC20.83■□□□□ 0.93
CNKSR3Q6P9H4 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CNKSR3Q6P9H4 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CNKSR3Q6P9H4 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CNKSR3Q6P9H4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
CNKSR3Q6P9H4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CNKSR3Q6P9H4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.82■□□□□ 0.92
CNKSR3Q6P9H4 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CNKSR3Q6P9H4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CNKSR3Q6P9H4 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CNKSR3Q6P9H4 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CNKSR3Q6P9H4 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CNKSR3Q6P9H4 AC009237.14-201ENST00000609975 1594 ntBASIC20.82■□□□□ 0.92
CNKSR3Q6P9H4 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CNKSR3Q6P9H4 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNKSR3Q6P9H4 HBZP1-201ENST00000354915 429 ntBASIC20.82■□□□□ 0.92
CNKSR3Q6P9H4 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CNKSR3Q6P9H4 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CNKSR3Q6P9H4 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CNKSR3Q6P9H4 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNKSR3Q6P9H4 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.82■□□□□ 0.92
CNKSR3Q6P9H4 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CNKSR3Q6P9H4 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.82■□□□□ 0.92
CNKSR3Q6P9H4 CR769767.2-201ENST00000622735 460 ntBASIC20.82■□□□□ 0.92
CNKSR3Q6P9H4 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNKSR3Q6P9H4 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CNKSR3Q6P9H4 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNKSR3Q6P9H4 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNKSR3Q6P9H4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.82■□□□□ 0.92
CNKSR3Q6P9H4 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CNKSR3Q6P9H4 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.82■□□□□ 0.92
CNKSR3Q6P9H4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNKSR3Q6P9H4 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CNKSR3Q6P9H4 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CNKSR3Q6P9H4 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CNKSR3Q6P9H4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNKSR3Q6P9H4 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.81■□□□□ 0.92
CNKSR3Q6P9H4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.81■□□□□ 0.92
CNKSR3Q6P9H4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNKSR3Q6P9H4 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.81■□□□□ 0.92
CNKSR3Q6P9H4 AL645929.1-201ENST00000420084 975 ntBASIC20.81■□□□□ 0.92
CNKSR3Q6P9H4 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNKSR3Q6P9H4 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.81■□□□□ 0.92
CNKSR3Q6P9H4 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.81■□□□□ 0.92
CNKSR3Q6P9H4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNKSR3Q6P9H4 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNKSR3Q6P9H4 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.81■□□□□ 0.92
CNKSR3Q6P9H4 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNKSR3Q6P9H4 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.81■□□□□ 0.92
CNKSR3Q6P9H4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNKSR3Q6P9H4 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
CNKSR3Q6P9H4 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CNKSR3Q6P9H4 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CNKSR3Q6P9H4 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.8■□□□□ 0.92
CNKSR3Q6P9H4 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CNKSR3Q6P9H4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.8■□□□□ 0.92
CNKSR3Q6P9H4 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
CNKSR3Q6P9H4 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms