Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL13A1Q5TAT6 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.88■■□□□ 1.09
COL13A1Q5TAT6 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.88■■□□□ 1.09
COL13A1Q5TAT6 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
COL13A1Q5TAT6 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL13A1Q5TAT6 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC21.87■■□□□ 1.09
COL13A1Q5TAT6 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL13A1Q5TAT6 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
COL13A1Q5TAT6 AL117328.2-201ENST00000624617 1940 ntBASIC21.87■■□□□ 1.09
COL13A1Q5TAT6 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC21.87■■□□□ 1.09
COL13A1Q5TAT6 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.87■■□□□ 1.09
COL13A1Q5TAT6 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
COL13A1Q5TAT6 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC21.87■■□□□ 1.09
COL13A1Q5TAT6 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC21.87■■□□□ 1.09
COL13A1Q5TAT6 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL13A1Q5TAT6 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL13A1Q5TAT6 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
COL13A1Q5TAT6 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
COL13A1Q5TAT6 TFP1-202ENST00000475455 1573 ntBASIC21.87■■□□□ 1.09
COL13A1Q5TAT6 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
COL13A1Q5TAT6 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL13A1Q5TAT6 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
COL13A1Q5TAT6 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL13A1Q5TAT6 EMD-201ENST00000369835 966 ntTSL 3 BASIC21.86■■□□□ 1.09
COL13A1Q5TAT6 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
COL13A1Q5TAT6 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC21.86■■□□□ 1.09
COL13A1Q5TAT6 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
COL13A1Q5TAT6 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC21.86■■□□□ 1.09
COL13A1Q5TAT6 AC024243.1-201ENST00000609234 778 ntBASIC21.86■■□□□ 1.09
COL13A1Q5TAT6 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
COL13A1Q5TAT6 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
COL13A1Q5TAT6 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL13A1Q5TAT6 UBC-206ENST00000538617 1303 ntTSL 5 BASIC21.85■■□□□ 1.09
COL13A1Q5TAT6 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL13A1Q5TAT6 METTL26-204ENST00000397665 558 ntTSL 2 BASIC21.85■■□□□ 1.09
COL13A1Q5TAT6 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC21.85■■□□□ 1.09
COL13A1Q5TAT6 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC21.85■■□□□ 1.09
COL13A1Q5TAT6 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC21.85■■□□□ 1.09
COL13A1Q5TAT6 AP002472.1-201ENST00000577490 586 ntBASIC21.85■■□□□ 1.09
COL13A1Q5TAT6 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.85■■□□□ 1.09
COL13A1Q5TAT6 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
COL13A1Q5TAT6 NSUN5P1-202ENST00000421140 1535 ntBASIC21.85■■□□□ 1.09
COL13A1Q5TAT6 NSUN5P2-203ENST00000457352 1529 ntBASIC21.85■■□□□ 1.09
COL13A1Q5TAT6 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL13A1Q5TAT6 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.84■■□□□ 1.09
COL13A1Q5TAT6 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.84■■□□□ 1.09
COL13A1Q5TAT6 Z83836.1-201ENST00000624605 1642 ntBASIC21.84■■□□□ 1.09
COL13A1Q5TAT6 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
COL13A1Q5TAT6 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC21.84■■□□□ 1.09
COL13A1Q5TAT6 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC21.84■■□□□ 1.09
COL13A1Q5TAT6 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL13A1Q5TAT6 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL13A1Q5TAT6 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
COL13A1Q5TAT6 ILF2-202ENST00000368681 726 ntTSL 2 BASIC21.84■■□□□ 1.09
COL13A1Q5TAT6 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC21.84■■□□□ 1.09
COL13A1Q5TAT6 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC21.84■■□□□ 1.09
COL13A1Q5TAT6 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
COL13A1Q5TAT6 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC21.84■■□□□ 1.09
COL13A1Q5TAT6 MIR4674-201ENST00000582457 87 ntBASIC21.84■■□□□ 1.09
COL13A1Q5TAT6 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC21.84■■□□□ 1.09
COL13A1Q5TAT6 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC21.84■■□□□ 1.09
COL13A1Q5TAT6 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.84■■□□□ 1.09
COL13A1Q5TAT6 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL13A1Q5TAT6 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
COL13A1Q5TAT6 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
COL13A1Q5TAT6 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC21.83■■□□□ 1.09
COL13A1Q5TAT6 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
COL13A1Q5TAT6 METTL26-205ENST00000397666 726 ntTSL 2 BASIC21.83■■□□□ 1.09
COL13A1Q5TAT6 AC015922.1-201ENST00000421102 1152 ntBASIC21.83■■□□□ 1.09
COL13A1Q5TAT6 GSAP-205ENST00000430584 600 ntTSL 5 BASIC21.83■■□□□ 1.09
COL13A1Q5TAT6 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC21.83■■□□□ 1.09
COL13A1Q5TAT6 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC21.83■■□□□ 1.09
COL13A1Q5TAT6 AC084346.2-201ENST00000607097 949 ntBASIC21.83■■□□□ 1.09
COL13A1Q5TAT6 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC21.83■■□□□ 1.09
COL13A1Q5TAT6 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
COL13A1Q5TAT6 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
COL13A1Q5TAT6 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
COL13A1Q5TAT6 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
COL13A1Q5TAT6 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.83■■□□□ 1.08
COL13A1Q5TAT6 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
COL13A1Q5TAT6 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.82■■□□□ 1.08
COL13A1Q5TAT6 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL13A1Q5TAT6 LINC01124-201ENST00000409786 2117 ntBASIC21.82■■□□□ 1.08
COL13A1Q5TAT6 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COL13A1Q5TAT6 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL13A1Q5TAT6 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL13A1Q5TAT6 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC21.82■■□□□ 1.08
COL13A1Q5TAT6 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COL13A1Q5TAT6 CFL1-202ENST00000524553 860 ntTSL 2 BASIC21.82■■□□□ 1.08
COL13A1Q5TAT6 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC21.82■■□□□ 1.08
COL13A1Q5TAT6 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC21.82■■□□□ 1.08
COL13A1Q5TAT6 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC21.82■■□□□ 1.08
COL13A1Q5TAT6 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC21.82■■□□□ 1.08
COL13A1Q5TAT6 AC008608.2-201ENST00000606089 416 ntBASIC21.82■■□□□ 1.08
COL13A1Q5TAT6 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL13A1Q5TAT6 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL13A1Q5TAT6 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
COL13A1Q5TAT6 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL13A1Q5TAT6 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL13A1Q5TAT6 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms