Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CACNA1EQ15878 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CACNA1EQ15878 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.87■□□□□ 0.61
CACNA1EQ15878 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CACNA1EQ15878 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.87■□□□□ 0.61
CACNA1EQ15878 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CACNA1EQ15878 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CACNA1EQ15878 NPAP1P7-201ENST00000613027 823 ntBASIC18.86■□□□□ 0.61
CACNA1EQ15878 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CACNA1EQ15878 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CACNA1EQ15878 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CACNA1EQ15878 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CACNA1EQ15878 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CACNA1EQ15878 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CACNA1EQ15878 AC079834.2-201ENST00000609776 1949 ntBASIC18.86■□□□□ 0.61
CACNA1EQ15878 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.86■□□□□ 0.61
CACNA1EQ15878 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.86■□□□□ 0.61
CACNA1EQ15878 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CACNA1EQ15878 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CACNA1EQ15878 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CACNA1EQ15878 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CACNA1EQ15878 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CACNA1EQ15878 SPDYE13P-201ENST00000445314 798 ntBASIC18.86■□□□□ 0.61
CACNA1EQ15878 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.86■□□□□ 0.61
CACNA1EQ15878 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.86■□□□□ 0.61
CACNA1EQ15878 AC004263.2-201ENST00000617183 678 ntBASIC18.86■□□□□ 0.61
CACNA1EQ15878 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CACNA1EQ15878 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CACNA1EQ15878 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CACNA1EQ15878 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CACNA1EQ15878 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CACNA1EQ15878 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.86■□□□□ 0.61
CACNA1EQ15878 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.86■□□□□ 0.61
CACNA1EQ15878 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CACNA1EQ15878 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.85■□□□□ 0.61
CACNA1EQ15878 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA1EQ15878 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA1EQ15878 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA1EQ15878 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA1EQ15878 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA1EQ15878 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.85■□□□□ 0.61
CACNA1EQ15878 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA1EQ15878 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA1EQ15878 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CACNA1EQ15878 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA1EQ15878 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA1EQ15878 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CACNA1EQ15878 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA1EQ15878 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.85■□□□□ 0.61
CACNA1EQ15878 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA1EQ15878 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA1EQ15878 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.85■□□□□ 0.61
CACNA1EQ15878 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA1EQ15878 ATP5G2P1-201ENST00000433580 426 ntBASIC18.85■□□□□ 0.61
CACNA1EQ15878 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.85■□□□□ 0.61
CACNA1EQ15878 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.85■□□□□ 0.61
CACNA1EQ15878 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA1EQ15878 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CACNA1EQ15878 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA1EQ15878 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.85■□□□□ 0.61
CACNA1EQ15878 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.85■□□□□ 0.61
CACNA1EQ15878 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.85■□□□□ 0.61
CACNA1EQ15878 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA1EQ15878 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.85■□□□□ 0.61
CACNA1EQ15878 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA1EQ15878 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA1EQ15878 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA1EQ15878 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.84■□□□□ 0.61
CACNA1EQ15878 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA1EQ15878 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CACNA1EQ15878 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.84■□□□□ 0.61
CACNA1EQ15878 AC111152.3-201ENST00000569699 673 ntBASIC18.84■□□□□ 0.61
CACNA1EQ15878 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA1EQ15878 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.84■□□□□ 0.61
CACNA1EQ15878 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA1EQ15878 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA1EQ15878 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA1EQ15878 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.84■□□□□ 0.61
CACNA1EQ15878 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA1EQ15878 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA1EQ15878 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CACNA1EQ15878 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA1EQ15878 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA1EQ15878 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA1EQ15878 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA1EQ15878 PVRIG2P-201ENST00000435460 978 ntBASIC18.84■□□□□ 0.61
CACNA1EQ15878 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA1EQ15878 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CACNA1EQ15878 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA1EQ15878 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.84■□□□□ 0.61
CACNA1EQ15878 AC036111.1-201ENST00000533973 1582 ntBASIC18.84■□□□□ 0.61
CACNA1EQ15878 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA1EQ15878 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA1EQ15878 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA1EQ15878 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA1EQ15878 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.84■□□□□ 0.61
CACNA1EQ15878 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
CACNA1EQ15878 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CACNA1EQ15878 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
CACNA1EQ15878 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms