Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC22.57■■□□□ 1.2
HTRA3P83110 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
HTRA3P83110 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
HTRA3P83110 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.56■■□□□ 1.2
HTRA3P83110 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC22.56■■□□□ 1.2
HTRA3P83110 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
HTRA3P83110 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
HTRA3P83110 AC233702.3-201ENST00000578656 1387 ntBASIC22.56■■□□□ 1.2
HTRA3P83110 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
HTRA3P83110 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
HTRA3P83110 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
HTRA3P83110 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
HTRA3P83110 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC22.56■■□□□ 1.2
HTRA3P83110 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC22.56■■□□□ 1.2
HTRA3P83110 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
HTRA3P83110 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
HTRA3P83110 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
HTRA3P83110 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
HTRA3P83110 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC22.56■■□□□ 1.2
HTRA3P83110 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
HTRA3P83110 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
HTRA3P83110 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
HTRA3P83110 AL117328.2-201ENST00000624617 1940 ntBASIC22.55■■□□□ 1.2
HTRA3P83110 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
HTRA3P83110 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC22.55■■□□□ 1.2
HTRA3P83110 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
HTRA3P83110 BUB3-202ENST00000368859 667 ntTSL 3 BASIC22.55■■□□□ 1.2
HTRA3P83110 FAM8A3P-201ENST00000427218 844 ntBASIC22.55■■□□□ 1.2
HTRA3P83110 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
HTRA3P83110 GLRB-205ENST00000512619 728 ntTSL 3 BASIC22.55■■□□□ 1.2
HTRA3P83110 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
HTRA3P83110 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC22.55■■□□□ 1.2
HTRA3P83110 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
HTRA3P83110 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC22.55■■□□□ 1.2
HTRA3P83110 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
HTRA3P83110 LITAF-211ENST00000572255 516 ntTSL 4 BASIC22.55■■□□□ 1.2
HTRA3P83110 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
HTRA3P83110 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC22.55■■□□□ 1.2
HTRA3P83110 AC092364.2-202ENST00000597012 1073 ntBASIC22.55■■□□□ 1.2
HTRA3P83110 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
HTRA3P83110 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
HTRA3P83110 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
HTRA3P83110 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HTRA3P83110 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC22.54■■□□□ 1.2
HTRA3P83110 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
HTRA3P83110 TBC1D3P2-202ENST00000577902 1649 ntBASIC22.54■■□□□ 1.2
HTRA3P83110 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC22.54■■□□□ 1.2
HTRA3P83110 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HTRA3P83110 TUB-203ENST00000534099 1759 ntTSL 2 BASIC22.54■■□□□ 1.2
HTRA3P83110 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HTRA3P83110 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HTRA3P83110 KRT8P41-201ENST00000533985 1514 ntBASIC22.54■■□□□ 1.2
HTRA3P83110 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HTRA3P83110 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC22.54■■□□□ 1.2
HTRA3P83110 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
HTRA3P83110 MIR662-201ENST00000384847 95 ntBASIC22.54■■□□□ 1.2
HTRA3P83110 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
HTRA3P83110 HLA-F-220ENST00000434407 884 ntBASIC22.54■■□□□ 1.2
HTRA3P83110 AF186996.4-201ENST00000467186 377 ntBASIC22.54■■□□□ 1.2
HTRA3P83110 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HTRA3P83110 UBC-206ENST00000538617 1303 ntTSL 5 BASIC22.54■■□□□ 1.2
HTRA3P83110 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.54■■□□□ 1.2
HTRA3P83110 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
HTRA3P83110 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
HTRA3P83110 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC22.53■■□□□ 1.2
HTRA3P83110 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
HTRA3P83110 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC22.53■■□□□ 1.2
HTRA3P83110 NUS1P2-201ENST00000417358 873 ntBASIC22.53■■□□□ 1.2
HTRA3P83110 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC22.53■■□□□ 1.2
HTRA3P83110 SCARNA2-201ENST00000458748 420 ntBASIC22.53■■□□□ 1.2
HTRA3P83110 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC22.53■■□□□ 1.2
HTRA3P83110 AC139887.3-201ENST00000568585 713 ntBASIC22.53■■□□□ 1.2
HTRA3P83110 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC22.53■■□□□ 1.2
HTRA3P83110 AL356488.2-201ENST00000602755 427 ntBASIC22.53■■□□□ 1.2
HTRA3P83110 AC083906.6-201ENST00000641366 219 ntBASIC22.53■■□□□ 1.2
HTRA3P83110 AC079781.4-201ENST00000641908 219 ntBASIC22.53■■□□□ 1.2
HTRA3P83110 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
HTRA3P83110 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
HTRA3P83110 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
HTRA3P83110 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
HTRA3P83110 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
HTRA3P83110 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HTRA3P83110 KRT16P6-202ENST00000425692 1426 ntBASIC22.52■■□□□ 1.2
HTRA3P83110 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
HTRA3P83110 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HTRA3P83110 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HTRA3P83110 IGHV3-47-201ENST00000425060 335 ntBASIC22.52■■□□□ 1.2
HTRA3P83110 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC22.52■■□□□ 1.2
HTRA3P83110 LHX6-205ENST00000464484 666 ntTSL 2 BASIC22.52■■□□□ 1.2
HTRA3P83110 CYMP-203ENST00000474680 1263 ntBASIC22.52■■□□□ 1.2
HTRA3P83110 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC22.52■■□□□ 1.2
HTRA3P83110 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC22.52■■□□□ 1.2
HTRA3P83110 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HTRA3P83110 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
HTRA3P83110 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HTRA3P83110 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
HTRA3P83110 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
HTRA3P83110 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
HTRA3P83110 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
HTRA3P83110 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms