Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GFRA1P56159 ECEL1P3-201ENST00000427961 737 ntBASIC17.37■□□□□ 0.37
GFRA1P56159 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GFRA1P56159 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.37■□□□□ 0.37
GFRA1P56159 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.37■□□□□ 0.37
GFRA1P56159 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
GFRA1P56159 AC096733.2-201ENST00000609937 1394 ntBASIC17.37■□□□□ 0.37
GFRA1P56159 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.37■□□□□ 0.37
GFRA1P56159 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.37■□□□□ 0.37
GFRA1P56159 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GFRA1P56159 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GFRA1P56159 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
GFRA1P56159 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.36■□□□□ 0.37
GFRA1P56159 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.36■□□□□ 0.37
GFRA1P56159 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GFRA1P56159 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.36■□□□□ 0.37
GFRA1P56159 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.36■□□□□ 0.37
GFRA1P56159 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GFRA1P56159 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
GFRA1P56159 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GFRA1P56159 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GFRA1P56159 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GFRA1P56159 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.36■□□□□ 0.37
GFRA1P56159 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
GFRA1P56159 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.36■□□□□ 0.37
GFRA1P56159 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.36■□□□□ 0.37
GFRA1P56159 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.36■□□□□ 0.37
GFRA1P56159 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GFRA1P56159 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
GFRA1P56159 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GFRA1P56159 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GFRA1P56159 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
GFRA1P56159 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.36■□□□□ 0.37
GFRA1P56159 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.36■□□□□ 0.37
GFRA1P56159 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.36■□□□□ 0.37
GFRA1P56159 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GFRA1P56159 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
GFRA1P56159 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GFRA1P56159 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
GFRA1P56159 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.35■□□□□ 0.37
GFRA1P56159 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.35■□□□□ 0.37
GFRA1P56159 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.35■□□□□ 0.37
GFRA1P56159 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.35■□□□□ 0.37
GFRA1P56159 SLC25A1P4-201ENST00000567977 778 ntBASIC17.35■□□□□ 0.37
GFRA1P56159 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.35■□□□□ 0.37
GFRA1P56159 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
GFRA1P56159 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.35■□□□□ 0.37
GFRA1P56159 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GFRA1P56159 CYP2D8P-201ENST00000433633 1490 ntBASIC17.35■□□□□ 0.37
GFRA1P56159 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
GFRA1P56159 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GFRA1P56159 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GFRA1P56159 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.35■□□□□ 0.37
GFRA1P56159 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
GFRA1P56159 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
GFRA1P56159 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.35■□□□□ 0.37
GFRA1P56159 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.35■□□□□ 0.37
GFRA1P56159 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GFRA1P56159 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GFRA1P56159 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GFRA1P56159 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.34■□□□□ 0.37
GFRA1P56159 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GFRA1P56159 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
GFRA1P56159 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GFRA1P56159 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GFRA1P56159 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GFRA1P56159 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GFRA1P56159 CRYGFP-201ENST00000418459 633 ntBASIC17.34■□□□□ 0.37
GFRA1P56159 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GFRA1P56159 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
GFRA1P56159 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.34■□□□□ 0.37
GFRA1P56159 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.34■□□□□ 0.37
GFRA1P56159 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.34■□□□□ 0.37
GFRA1P56159 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.34■□□□□ 0.37
GFRA1P56159 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GFRA1P56159 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
GFRA1P56159 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.34■□□□□ 0.37
GFRA1P56159 NAPSB-206ENST00000562112 1266 ntBASIC17.34■□□□□ 0.37
GFRA1P56159 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GFRA1P56159 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.34■□□□□ 0.37
GFRA1P56159 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.34■□□□□ 0.37
GFRA1P56159 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GFRA1P56159 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.34■□□□□ 0.37
GFRA1P56159 AC010947.1-201ENST00000623454 693 ntBASIC17.34■□□□□ 0.37
GFRA1P56159 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.34■□□□□ 0.37
GFRA1P56159 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.33■□□□□ 0.37
GFRA1P56159 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GFRA1P56159 AC073130.3-201ENST00000624389 2278 ntBASIC17.33■□□□□ 0.37
GFRA1P56159 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
GFRA1P56159 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.33■□□□□ 0.37
GFRA1P56159 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
GFRA1P56159 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
GFRA1P56159 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.33■□□□□ 0.37
GFRA1P56159 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
GFRA1P56159 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
GFRA1P56159 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.37
GFRA1P56159 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GFRA1P56159 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.33■□□□□ 0.37
GFRA1P56159 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.33■□□□□ 0.37
GFRA1P56159 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms