Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.61■□□□□ 0.89
BRCC3P46736 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.61■□□□□ 0.89
BRCC3P46736 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.61■□□□□ 0.89
BRCC3P46736 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.61■□□□□ 0.89
BRCC3P46736 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
BRCC3P46736 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BRCC3P46736 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BRCC3P46736 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BRCC3P46736 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
BRCC3P46736 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.6■□□□□ 0.89
BRCC3P46736 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
BRCC3P46736 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
BRCC3P46736 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.6■□□□□ 0.89
BRCC3P46736 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
BRCC3P46736 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.6■□□□□ 0.89
BRCC3P46736 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
BRCC3P46736 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.6■□□□□ 0.89
BRCC3P46736 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.6■□□□□ 0.89
BRCC3P46736 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
BRCC3P46736 AL445228.2-201ENST00000605589 952 ntBASIC20.6■□□□□ 0.89
BRCC3P46736 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
BRCC3P46736 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
BRCC3P46736 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.6■□□□□ 0.89
BRCC3P46736 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
BRCC3P46736 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.6■□□□□ 0.89
BRCC3P46736 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BRCC3P46736 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.6■□□□□ 0.89
BRCC3P46736 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
BRCC3P46736 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.6■□□□□ 0.89
BRCC3P46736 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BRCC3P46736 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.59■□□□□ 0.89
BRCC3P46736 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BRCC3P46736 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
BRCC3P46736 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.59■□□□□ 0.89
BRCC3P46736 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
BRCC3P46736 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BRCC3P46736 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BRCC3P46736 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.59■□□□□ 0.89
BRCC3P46736 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BRCC3P46736 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
BRCC3P46736 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.59■□□□□ 0.89
BRCC3P46736 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
BRCC3P46736 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
BRCC3P46736 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.59■□□□□ 0.89
BRCC3P46736 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
BRCC3P46736 LIN28AP1-201ENST00000429574 405 ntBASIC20.59■□□□□ 0.89
BRCC3P46736 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BRCC3P46736 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
BRCC3P46736 KRT18P35-201ENST00000510488 1269 ntBASIC20.59■□□□□ 0.89
BRCC3P46736 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.59■□□□□ 0.89
BRCC3P46736 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
BRCC3P46736 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.59■□□□□ 0.89
BRCC3P46736 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
BRCC3P46736 AC116562.4-202ENST00000641738 218 ntBASIC20.59■□□□□ 0.89
BRCC3P46736 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.59■□□□□ 0.89
BRCC3P46736 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BRCC3P46736 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BRCC3P46736 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.59■□□□□ 0.89
BRCC3P46736 AC104417.2-201ENST00000562989 1793 ntBASIC20.59■□□□□ 0.89
BRCC3P46736 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
BRCC3P46736 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
BRCC3P46736 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
BRCC3P46736 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BRCC3P46736 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BRCC3P46736 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
BRCC3P46736 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
BRCC3P46736 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BRCC3P46736 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BRCC3P46736 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
BRCC3P46736 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
BRCC3P46736 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
BRCC3P46736 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.58■□□□□ 0.89
BRCC3P46736 AC007663.1-201ENST00000438948 1240 ntBASIC20.58■□□□□ 0.89
BRCC3P46736 ATP5G1P1-201ENST00000448724 379 ntBASIC20.58■□□□□ 0.89
BRCC3P46736 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
BRCC3P46736 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.58■□□□□ 0.89
BRCC3P46736 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.58■□□□□ 0.89
BRCC3P46736 CKBP1-201ENST00000565489 1086 ntBASIC20.58■□□□□ 0.89
BRCC3P46736 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
BRCC3P46736 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
BRCC3P46736 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
BRCC3P46736 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.58■□□□□ 0.88
BRCC3P46736 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
BRCC3P46736 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
BRCC3P46736 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BRCC3P46736 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BRCC3P46736 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BRCC3P46736 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.58■□□□□ 0.88
BRCC3P46736 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
BRCC3P46736 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRCC3P46736 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.57■□□□□ 0.88
BRCC3P46736 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BRCC3P46736 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRCC3P46736 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BRCC3P46736 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
BRCC3P46736 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.57■□□□□ 0.88
BRCC3P46736 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BRCC3P46736 KRT8P11-201ENST00000409686 1436 ntBASIC20.57■□□□□ 0.88
BRCC3P46736 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BRCC3P46736 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms