Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
PDE6BP35913 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
PDE6BP35913 PRELID1P1-202ENST00000567272 903 ntBASIC23.89■■□□□ 1.41
PDE6BP35913 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
PDE6BP35913 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
PDE6BP35913 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PDE6BP35913 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
PDE6BP35913 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PDE6BP35913 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PDE6BP35913 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PDE6BP35913 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
PDE6BP35913 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC23.88■■□□□ 1.41
PDE6BP35913 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PDE6BP35913 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PDE6BP35913 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC23.88■■□□□ 1.41
PDE6BP35913 AC246785.2-201ENST00000432512 513 ntBASIC23.88■■□□□ 1.41
PDE6BP35913 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC23.88■■□□□ 1.41
PDE6BP35913 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC23.88■■□□□ 1.41
PDE6BP35913 AC092329.2-201ENST00000598402 547 ntBASIC23.88■■□□□ 1.41
PDE6BP35913 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDE6BP35913 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.87■■□□□ 1.41
PDE6BP35913 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDE6BP35913 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDE6BP35913 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PDE6BP35913 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDE6BP35913 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDE6BP35913 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC23.87■■□□□ 1.41
PDE6BP35913 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC23.87■■□□□ 1.41
PDE6BP35913 RN7SL510P-201ENST00000581311 263 ntBASIC23.87■■□□□ 1.41
PDE6BP35913 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
PDE6BP35913 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDE6BP35913 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDE6BP35913 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDE6BP35913 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PDE6BP35913 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC23.87■■□□□ 1.41
PDE6BP35913 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDE6BP35913 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDE6BP35913 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PDE6BP35913 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC23.86■■□□□ 1.41
PDE6BP35913 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC23.86■■□□□ 1.41
PDE6BP35913 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PDE6BP35913 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC23.86■■□□□ 1.41
PDE6BP35913 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
PDE6BP35913 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC23.86■■□□□ 1.41
PDE6BP35913 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PDE6BP35913 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PDE6BP35913 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PDE6BP35913 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC23.86■■□□□ 1.41
PDE6BP35913 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC23.86■■□□□ 1.41
PDE6BP35913 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PDE6BP35913 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC23.86■■□□□ 1.41
PDE6BP35913 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC23.86■■□□□ 1.41
PDE6BP35913 KLK8-205ENST00000593490 267 ntTSL 3 BASIC23.86■■□□□ 1.41
PDE6BP35913 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PDE6BP35913 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC23.86■■□□□ 1.41
PDE6BP35913 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC23.86■■□□□ 1.41
PDE6BP35913 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC23.86■■□□□ 1.41
PDE6BP35913 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
PDE6BP35913 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PDE6BP35913 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PDE6BP35913 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
PDE6BP35913 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PDE6BP35913 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC23.85■■□□□ 1.41
PDE6BP35913 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC23.85■■□□□ 1.41
PDE6BP35913 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC23.85■■□□□ 1.41
PDE6BP35913 MIR4674-201ENST00000582457 87 ntBASIC23.85■■□□□ 1.41
PDE6BP35913 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC23.85■■□□□ 1.41
PDE6BP35913 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PDE6BP35913 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC23.85■■□□□ 1.41
PDE6BP35913 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC23.84■■□□□ 1.41
PDE6BP35913 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PDE6BP35913 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PDE6BP35913 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PDE6BP35913 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PDE6BP35913 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC23.84■■□□□ 1.41
PDE6BP35913 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC23.84■■□□□ 1.41
PDE6BP35913 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PDE6BP35913 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC23.84■■□□□ 1.41
PDE6BP35913 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC23.84■■□□□ 1.41
PDE6BP35913 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC23.84■■□□□ 1.41
PDE6BP35913 RASA4DP-201ENST00000460726 1199 ntBASIC23.84■■□□□ 1.41
PDE6BP35913 AC034232.1-201ENST00000506026 1064 ntBASIC23.84■■□□□ 1.41
PDE6BP35913 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC23.84■■□□□ 1.41
PDE6BP35913 SKP2-204ENST00000508514 821 ntTSL 3 BASIC23.84■■□□□ 1.41
PDE6BP35913 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC23.84■■□□□ 1.41
PDE6BP35913 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC23.84■■□□□ 1.41
PDE6BP35913 CR769767.2-201ENST00000622735 460 ntBASIC23.84■■□□□ 1.41
PDE6BP35913 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
PDE6BP35913 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PDE6BP35913 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC23.84■■□□□ 1.41
PDE6BP35913 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PDE6BP35913 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PDE6BP35913 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PDE6BP35913 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
PDE6BP35913 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
PDE6BP35913 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PDE6BP35913 ILF2-202ENST00000368681 726 ntTSL 2 BASIC23.83■■□□□ 1.41
PDE6BP35913 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
PDE6BP35913 FDX1P1-201ENST00000449115 551 ntBASIC23.83■■□□□ 1.41
PDE6BP35913 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC23.83■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms