Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
HOXA11P31270 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.97■□□□□ 0.95
HOXA11P31270 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
HOXA11P31270 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
HOXA11P31270 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
HOXA11P31270 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HOXA11P31270 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.97■□□□□ 0.95
HOXA11P31270 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.97■□□□□ 0.95
HOXA11P31270 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HOXA11P31270 CCR12P-201ENST00000446203 998 ntBASIC20.97■□□□□ 0.95
HOXA11P31270 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HOXA11P31270 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
HOXA11P31270 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.97■□□□□ 0.95
HOXA11P31270 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HOXA11P31270 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.97■□□□□ 0.95
HOXA11P31270 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HOXA11P31270 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HOXA11P31270 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
HOXA11P31270 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HOXA11P31270 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HOXA11P31270 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HOXA11P31270 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HOXA11P31270 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HOXA11P31270 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.96■□□□□ 0.95
HOXA11P31270 AC125437.2-201ENST00000625180 2167 ntBASIC20.96■□□□□ 0.95
HOXA11P31270 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.96■□□□□ 0.95
HOXA11P31270 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.96■□□□□ 0.95
HOXA11P31270 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.96■□□□□ 0.95
HOXA11P31270 AL353719.1-201ENST00000566847 864 ntBASIC20.96■□□□□ 0.95
HOXA11P31270 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
HOXA11P31270 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HOXA11P31270 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HOXA11P31270 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
HOXA11P31270 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
HOXA11P31270 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.95■□□□□ 0.95
HOXA11P31270 SDHAP1-207ENST00000440850 2000 ntBASIC20.95■□□□□ 0.94
HOXA11P31270 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HOXA11P31270 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HOXA11P31270 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.95■□□□□ 0.94
HOXA11P31270 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.95■□□□□ 0.94
HOXA11P31270 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HOXA11P31270 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HOXA11P31270 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
HOXA11P31270 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
HOXA11P31270 HMGA1P5-201ENST00000412453 271 ntBASIC20.95■□□□□ 0.94
HOXA11P31270 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HOXA11P31270 CA15P1-201ENST00000481698 905 ntBASIC20.95■□□□□ 0.94
HOXA11P31270 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.95■□□□□ 0.94
HOXA11P31270 AL049597.2-201ENST00000565575 961 ntBASIC20.95■□□□□ 0.94
HOXA11P31270 AL445228.2-201ENST00000605589 952 ntBASIC20.95■□□□□ 0.94
HOXA11P31270 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.95■□□□□ 0.94
HOXA11P31270 AC006011.2-201ENST00000621313 1158 ntBASIC20.95■□□□□ 0.94
HOXA11P31270 AC010653.2-201ENST00000623505 997 ntBASIC20.95■□□□□ 0.94
HOXA11P31270 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.95■□□□□ 0.94
HOXA11P31270 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
HOXA11P31270 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HOXA11P31270 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HOXA11P31270 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HOXA11P31270 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
HOXA11P31270 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
HOXA11P31270 PCDHAC2-203ENST00000615316 3011 ntBASIC20.94■□□□□ 0.94
HOXA11P31270 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HOXA11P31270 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.94■□□□□ 0.94
HOXA11P31270 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
HOXA11P31270 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HOXA11P31270 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
HOXA11P31270 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.94■□□□□ 0.94
HOXA11P31270 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.94■□□□□ 0.94
HOXA11P31270 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HOXA11P31270 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
HOXA11P31270 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HOXA11P31270 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HOXA11P31270 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HOXA11P31270 TSPY17P-201ENST00000450329 467 ntBASIC20.94■□□□□ 0.94
HOXA11P31270 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HOXA11P31270 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
HOXA11P31270 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HOXA11P31270 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HOXA11P31270 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HOXA11P31270 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HOXA11P31270 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HOXA11P31270 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
HOXA11P31270 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HOXA11P31270 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HOXA11P31270 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.93■□□□□ 0.94
HOXA11P31270 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HOXA11P31270 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HOXA11P31270 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HOXA11P31270 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HOXA11P31270 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HOXA11P31270 LIN28AP1-201ENST00000429574 405 ntBASIC20.93■□□□□ 0.94
HOXA11P31270 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.93■□□□□ 0.94
HOXA11P31270 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HOXA11P31270 AL138966.2-201ENST00000621997 464 ntBASIC20.93■□□□□ 0.94
HOXA11P31270 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
HOXA11P31270 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.93■□□□□ 0.94
HOXA11P31270 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
HOXA11P31270 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HOXA11P31270 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.93■□□□□ 0.94
HOXA11P31270 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms