Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.99■□□□□ 0.63
LAMA1P25391 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.99■□□□□ 0.63
LAMA1P25391 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.99■□□□□ 0.63
LAMA1P25391 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
LAMA1P25391 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
LAMA1P25391 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LAMA1P25391 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
LAMA1P25391 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LAMA1P25391 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LAMA1P25391 CKBP1-201ENST00000565489 1086 ntBASIC18.99■□□□□ 0.63
LAMA1P25391 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.99■□□□□ 0.63
LAMA1P25391 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.98■□□□□ 0.63
LAMA1P25391 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
LAMA1P25391 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.98■□□□□ 0.63
LAMA1P25391 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LAMA1P25391 CA15P1-201ENST00000481698 905 ntBASIC18.98■□□□□ 0.63
LAMA1P25391 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.98■□□□□ 0.63
LAMA1P25391 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.98■□□□□ 0.63
LAMA1P25391 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LAMA1P25391 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
LAMA1P25391 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LAMA1P25391 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LAMA1P25391 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LAMA1P25391 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.98■□□□□ 0.63
LAMA1P25391 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.98■□□□□ 0.63
LAMA1P25391 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
LAMA1P25391 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LAMA1P25391 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.97■□□□□ 0.63
LAMA1P25391 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
LAMA1P25391 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LAMA1P25391 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
LAMA1P25391 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LAMA1P25391 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LAMA1P25391 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LAMA1P25391 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.97■□□□□ 0.63
LAMA1P25391 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
LAMA1P25391 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.97■□□□□ 0.63
LAMA1P25391 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
LAMA1P25391 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.97■□□□□ 0.63
LAMA1P25391 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.97■□□□□ 0.63
LAMA1P25391 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.97■□□□□ 0.63
LAMA1P25391 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LAMA1P25391 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.97■□□□□ 0.63
LAMA1P25391 UNC93B7-201ENST00000509439 705 ntBASIC18.97■□□□□ 0.63
LAMA1P25391 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.97■□□□□ 0.63
LAMA1P25391 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LAMA1P25391 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
LAMA1P25391 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LAMA1P25391 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LAMA1P25391 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LAMA1P25391 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.96■□□□□ 0.63
LAMA1P25391 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LAMA1P25391 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
LAMA1P25391 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
LAMA1P25391 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
LAMA1P25391 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LAMA1P25391 STARP1-201ENST00000397973 869 ntBASIC18.96■□□□□ 0.63
LAMA1P25391 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.96■□□□□ 0.63
LAMA1P25391 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.96■□□□□ 0.63
LAMA1P25391 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LAMA1P25391 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.96■□□□□ 0.63
LAMA1P25391 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LAMA1P25391 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
LAMA1P25391 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.96■□□□□ 0.63
LAMA1P25391 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
LAMA1P25391 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LAMA1P25391 ATP5G2P1-201ENST00000433580 426 ntBASIC18.96■□□□□ 0.63
LAMA1P25391 AC111152.3-201ENST00000569699 673 ntBASIC18.96■□□□□ 0.63
LAMA1P25391 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
LAMA1P25391 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LAMA1P25391 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.62
LAMA1P25391 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.95■□□□□ 0.62
LAMA1P25391 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LAMA1P25391 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
LAMA1P25391 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.95■□□□□ 0.62
LAMA1P25391 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.95■□□□□ 0.62
LAMA1P25391 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LAMA1P25391 AL031432.5-201ENST00000641059 760 ntBASIC18.95■□□□□ 0.62
LAMA1P25391 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LAMA1P25391 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
LAMA1P25391 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.95■□□□□ 0.62
LAMA1P25391 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.95■□□□□ 0.62
LAMA1P25391 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.95■□□□□ 0.62
LAMA1P25391 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LAMA1P25391 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.95■□□□□ 0.62
LAMA1P25391 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LAMA1P25391 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LAMA1P25391 AL512408.1-201ENST00000569378 2000 ntBASIC18.95■□□□□ 0.62
LAMA1P25391 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LAMA1P25391 AC009078.2-202ENST00000463353 338 ntBASIC18.94■□□□□ 0.62
LAMA1P25391 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LAMA1P25391 AC140113.3-201ENST00000605663 199 ntBASIC18.94■□□□□ 0.62
LAMA1P25391 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.94■□□□□ 0.62
LAMA1P25391 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.94■□□□□ 0.62
LAMA1P25391 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.94■□□□□ 0.62
LAMA1P25391 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LAMA1P25391 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LAMA1P25391 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LAMA1P25391 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LAMA1P25391 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms