Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.13■□□□□ 0.33
ERCC1P07992 RPS2P52-201ENST00000469610 820 ntBASIC17.13■□□□□ 0.33
ERCC1P07992 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.13■□□□□ 0.33
ERCC1P07992 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.13■□□□□ 0.33
ERCC1P07992 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.13■□□□□ 0.33
ERCC1P07992 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
ERCC1P07992 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ERCC1P07992 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.13■□□□□ 0.33
ERCC1P07992 PTBP1P-201ENST00000554374 1601 ntBASIC17.13■□□□□ 0.33
ERCC1P07992 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ERCC1P07992 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ERCC1P07992 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ERCC1P07992 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
ERCC1P07992 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
ERCC1P07992 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ERCC1P07992 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ERCC1P07992 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ERCC1P07992 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.13■□□□□ 0.33
ERCC1P07992 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ERCC1P07992 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
ERCC1P07992 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ERCC1P07992 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ERCC1P07992 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
ERCC1P07992 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ERCC1P07992 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ERCC1P07992 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
ERCC1P07992 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ERCC1P07992 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ERCC1P07992 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.12■□□□□ 0.33
ERCC1P07992 AC023632.3-201ENST00000521633 145 ntBASIC17.12■□□□□ 0.33
ERCC1P07992 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.12■□□□□ 0.33
ERCC1P07992 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
ERCC1P07992 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ERCC1P07992 RN7SL471P-201ENST00000580476 299 ntBASIC17.12■□□□□ 0.33
ERCC1P07992 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.12■□□□□ 0.33
ERCC1P07992 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ERCC1P07992 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.12■□□□□ 0.33
ERCC1P07992 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.12■□□□□ 0.33
ERCC1P07992 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ERCC1P07992 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ERCC1P07992 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ERCC1P07992 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ERCC1P07992 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
ERCC1P07992 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ERCC1P07992 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ERCC1P07992 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
ERCC1P07992 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
ERCC1P07992 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.11■□□□□ 0.33
ERCC1P07992 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ERCC1P07992 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.11■□□□□ 0.33
ERCC1P07992 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ERCC1P07992 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ERCC1P07992 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ERCC1P07992 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.11■□□□□ 0.33
ERCC1P07992 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.11■□□□□ 0.33
ERCC1P07992 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
ERCC1P07992 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ERCC1P07992 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ERCC1P07992 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.11■□□□□ 0.33
ERCC1P07992 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.11■□□□□ 0.33
ERCC1P07992 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ERCC1P07992 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.11■□□□□ 0.33
ERCC1P07992 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ERCC1P07992 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ERCC1P07992 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ERCC1P07992 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.11■□□□□ 0.33
ERCC1P07992 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.11■□□□□ 0.33
ERCC1P07992 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.11■□□□□ 0.33
ERCC1P07992 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ERCC1P07992 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.11■□□□□ 0.33
ERCC1P07992 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.11■□□□□ 0.33
ERCC1P07992 RPPH1-201ENST00000516869 333 ntBASIC17.11■□□□□ 0.33
ERCC1P07992 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.11■□□□□ 0.33
ERCC1P07992 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.11■□□□□ 0.33
ERCC1P07992 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.11■□□□□ 0.33
ERCC1P07992 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.11■□□□□ 0.33
ERCC1P07992 AC120498.8-201ENST00000614275 531 ntBASIC17.11■□□□□ 0.33
ERCC1P07992 AC006557.6-201ENST00000623071 864 ntBASIC17.11■□□□□ 0.33
ERCC1P07992 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.11■□□□□ 0.33
ERCC1P07992 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ERCC1P07992 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ERCC1P07992 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.11■□□□□ 0.33
ERCC1P07992 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.11■□□□□ 0.33
ERCC1P07992 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ERCC1P07992 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ERCC1P07992 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.11■□□□□ 0.33
ERCC1P07992 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
ERCC1P07992 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERCC1P07992 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.1■□□□□ 0.33
ERCC1P07992 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.1■□□□□ 0.33
ERCC1P07992 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ERCC1P07992 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
ERCC1P07992 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.1■□□□□ 0.33
ERCC1P07992 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERCC1P07992 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERCC1P07992 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.1■□□□□ 0.33
ERCC1P07992 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERCC1P07992 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.1■□□□□ 0.33
ERCC1P07992 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.1■□□□□ 0.33
ERCC1P07992 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms