Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CTSDP07339 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CTSDP07339 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CTSDP07339 AC005332.8-201ENST00000622750 2735 ntBASIC16.06■□□□□ 0.16
CTSDP07339 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CTSDP07339 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.06■□□□□ 0.16
CTSDP07339 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CTSDP07339 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CTSDP07339 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CTSDP07339 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.06■□□□□ 0.16
CTSDP07339 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CTSDP07339 AC116351.2-201ENST00000606540 1585 ntBASIC16.06■□□□□ 0.16
CTSDP07339 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.06■□□□□ 0.16
CTSDP07339 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.06■□□□□ 0.16
CTSDP07339 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CTSDP07339 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC16.06■□□□□ 0.16
CTSDP07339 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC16.06■□□□□ 0.16
CTSDP07339 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC16.06■□□□□ 0.16
CTSDP07339 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC16.06■□□□□ 0.16
CTSDP07339 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.06■□□□□ 0.16
CTSDP07339 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CTSDP07339 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CTSDP07339 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CTSDP07339 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.06■□□□□ 0.16
CTSDP07339 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CTSDP07339 FP475955.4-201ENST00000623131 1990 ntBASIC16.06■□□□□ 0.16
CTSDP07339 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
CTSDP07339 AL354751.1-201ENST00000412768 1863 ntBASIC16.05■□□□□ 0.16
CTSDP07339 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CTSDP07339 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CTSDP07339 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.05■□□□□ 0.16
CTSDP07339 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CTSDP07339 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CTSDP07339 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CTSDP07339 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CTSDP07339 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CTSDP07339 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.05■□□□□ 0.16
CTSDP07339 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CTSDP07339 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CTSDP07339 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.05■□□□□ 0.16
CTSDP07339 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CTSDP07339 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.05■□□□□ 0.16
CTSDP07339 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CTSDP07339 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CTSDP07339 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
CTSDP07339 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CTSDP07339 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC16.05■□□□□ 0.16
CTSDP07339 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CTSDP07339 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CTSDP07339 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.05■□□□□ 0.16
CTSDP07339 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.05■□□□□ 0.16
CTSDP07339 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
CTSDP07339 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CTSDP07339 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CTSDP07339 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
CTSDP07339 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CTSDP07339 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.05■□□□□ 0.16
CTSDP07339 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.05■□□□□ 0.16
CTSDP07339 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CTSDP07339 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CTSDP07339 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CTSDP07339 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CTSDP07339 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CTSDP07339 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CTSDP07339 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CTSDP07339 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CTSDP07339 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CTSDP07339 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.04■□□□□ 0.16
CTSDP07339 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CTSDP07339 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CTSDP07339 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CTSDP07339 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CTSDP07339 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CTSDP07339 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CTSDP07339 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CTSDP07339 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CTSDP07339 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CTSDP07339 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC16.04■□□□□ 0.16
CTSDP07339 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC16.04■□□□□ 0.16
CTSDP07339 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.04■□□□□ 0.16
CTSDP07339 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CTSDP07339 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CTSDP07339 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CTSDP07339 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CTSDP07339 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CTSDP07339 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CTSDP07339 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CTSDP07339 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CTSDP07339 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.04■□□□□ 0.16
CTSDP07339 AL512353.2-201ENST00000448759 1962 ntBASIC16.04■□□□□ 0.16
CTSDP07339 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CTSDP07339 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CTSDP07339 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.04■□□□□ 0.16
CTSDP07339 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.04■□□□□ 0.16
CTSDP07339 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CTSDP07339 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.03■□□□□ 0.16
CTSDP07339 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.03■□□□□ 0.16
CTSDP07339 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CTSDP07339 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CTSDP07339 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms