Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC22.12■■□□□ 1.13
ALDH1A1P00352 MPI-205ENST00000562606 1052 ntTSL 3 BASIC22.12■■□□□ 1.13
ALDH1A1P00352 MIR4674-201ENST00000582457 87 ntBASIC22.12■■□□□ 1.13
ALDH1A1P00352 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
ALDH1A1P00352 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC22.12■■□□□ 1.13
ALDH1A1P00352 AP001271.2-201ENST00000624018 1556 ntBASIC22.12■■□□□ 1.13
ALDH1A1P00352 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
ALDH1A1P00352 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
ALDH1A1P00352 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC22.12■■□□□ 1.13
ALDH1A1P00352 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
ALDH1A1P00352 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ALDH1A1P00352 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC22.11■■□□□ 1.13
ALDH1A1P00352 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
ALDH1A1P00352 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
ALDH1A1P00352 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ALDH1A1P00352 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ALDH1A1P00352 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ALDH1A1P00352 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ALDH1A1P00352 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC22.11■■□□□ 1.13
ALDH1A1P00352 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC22.11■■□□□ 1.13
ALDH1A1P00352 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC22.11■■□□□ 1.13
ALDH1A1P00352 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
ALDH1A1P00352 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
ALDH1A1P00352 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
ALDH1A1P00352 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC22.11■■□□□ 1.13
ALDH1A1P00352 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.11■■□□□ 1.13
ALDH1A1P00352 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
ALDH1A1P00352 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ALDH1A1P00352 AL162741.1-201ENST00000565563 1558 ntBASIC22.11■■□□□ 1.13
ALDH1A1P00352 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC22.11■■□□□ 1.13
ALDH1A1P00352 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ALDH1A1P00352 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
ALDH1A1P00352 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC22.1■■□□□ 1.13
ALDH1A1P00352 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
ALDH1A1P00352 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ALDH1A1P00352 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ALDH1A1P00352 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ALDH1A1P00352 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
ALDH1A1P00352 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
ALDH1A1P00352 DRAXINP1-201ENST00000437611 948 ntBASIC22.1■■□□□ 1.13
ALDH1A1P00352 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
ALDH1A1P00352 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
ALDH1A1P00352 AP002469.2-201ENST00000531724 424 ntBASIC22.1■■□□□ 1.13
ALDH1A1P00352 SLC25A6P4-201ENST00000586535 553 ntBASIC22.1■■□□□ 1.13
ALDH1A1P00352 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC22.1■■□□□ 1.13
ALDH1A1P00352 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
ALDH1A1P00352 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC22.1■■□□□ 1.13
ALDH1A1P00352 CD37-204ENST00000535669 1674 ntTSL 2 BASIC22.1■■□□□ 1.13
ALDH1A1P00352 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC22.1■■□□□ 1.13
ALDH1A1P00352 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
ALDH1A1P00352 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
ALDH1A1P00352 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC22.09■■□□□ 1.13
ALDH1A1P00352 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ALDH1A1P00352 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
ALDH1A1P00352 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
ALDH1A1P00352 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ALDH1A1P00352 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ALDH1A1P00352 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC22.09■■□□□ 1.13
ALDH1A1P00352 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC22.09■■□□□ 1.13
ALDH1A1P00352 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC22.09■■□□□ 1.13
ALDH1A1P00352 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
ALDH1A1P00352 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC22.09■■□□□ 1.13
ALDH1A1P00352 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC22.09■■□□□ 1.13
ALDH1A1P00352 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
ALDH1A1P00352 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
ALDH1A1P00352 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ALDH1A1P00352 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ALDH1A1P00352 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
ALDH1A1P00352 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
ALDH1A1P00352 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
ALDH1A1P00352 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
ALDH1A1P00352 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
ALDH1A1P00352 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.13
ALDH1A1P00352 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC22.08■■□□□ 1.13
ALDH1A1P00352 AC079776.4-201ENST00000511039 504 ntBASIC22.08■■□□□ 1.13
ALDH1A1P00352 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC22.08■■□□□ 1.13
ALDH1A1P00352 PNN-202ENST00000553331 656 ntTSL 3 BASIC22.08■■□□□ 1.13
ALDH1A1P00352 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC22.08■■□□□ 1.13
ALDH1A1P00352 AC012615.1-201ENST00000565797 1299 ntBASIC22.08■■□□□ 1.13
ALDH1A1P00352 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC22.08■■□□□ 1.13
ALDH1A1P00352 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC22.08■■□□□ 1.13
ALDH1A1P00352 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC22.08■■□□□ 1.13
ALDH1A1P00352 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
ALDH1A1P00352 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
ALDH1A1P00352 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
ALDH1A1P00352 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
ALDH1A1P00352 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.07■■□□□ 1.12
ALDH1A1P00352 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC22.07■■□□□ 1.12
ALDH1A1P00352 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
ALDH1A1P00352 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ALDH1A1P00352 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC22.07■■□□□ 1.12
ALDH1A1P00352 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC22.07■■□□□ 1.12
ALDH1A1P00352 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
ALDH1A1P00352 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
ALDH1A1P00352 KRT18P31-201ENST00000506277 1292 ntBASIC22.07■■□□□ 1.12
ALDH1A1P00352 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC22.07■■□□□ 1.12
ALDH1A1P00352 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC22.07■■□□□ 1.12
ALDH1A1P00352 NAA38-203ENST00000575071 553 ntTSL 2 BASIC22.07■■□□□ 1.12
ALDH1A1P00352 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
ALDH1A1P00352 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC22.07■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms