Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CPNE6O95741 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.99■□□□□ 0.63
CPNE6O95741 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.99■□□□□ 0.63
CPNE6O95741 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE6O95741 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CPNE6O95741 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE6O95741 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.99■□□□□ 0.63
CPNE6O95741 MIR1238-201ENST00000408483 83 ntBASIC18.99■□□□□ 0.63
CPNE6O95741 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.99■□□□□ 0.63
CPNE6O95741 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.99■□□□□ 0.63
CPNE6O95741 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.99■□□□□ 0.63
CPNE6O95741 AC145285.6-201ENST00000604632 637 ntBASIC18.99■□□□□ 0.63
CPNE6O95741 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.99■□□□□ 0.63
CPNE6O95741 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.99■□□□□ 0.63
CPNE6O95741 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.99■□□□□ 0.63
CPNE6O95741 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.99■□□□□ 0.63
CPNE6O95741 AL031985.4-201ENST00000642138 673 ntBASIC18.99■□□□□ 0.63
CPNE6O95741 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE6O95741 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE6O95741 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE6O95741 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.99■□□□□ 0.63
CPNE6O95741 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE6O95741 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE6O95741 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.99■□□□□ 0.63
CPNE6O95741 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE6O95741 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE6O95741 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CPNE6O95741 AC018553.1-201ENST00000616682 1458 ntBASIC18.98■□□□□ 0.63
CPNE6O95741 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE6O95741 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.98■□□□□ 0.63
CPNE6O95741 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
CPNE6O95741 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE6O95741 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE6O95741 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.98■□□□□ 0.63
CPNE6O95741 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.98■□□□□ 0.63
CPNE6O95741 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.98■□□□□ 0.63
CPNE6O95741 MIR6786-201ENST00000616843 113 ntBASIC18.98■□□□□ 0.63
CPNE6O95741 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CPNE6O95741 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CPNE6O95741 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CPNE6O95741 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE6O95741 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.98■□□□□ 0.63
CPNE6O95741 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE6O95741 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE6O95741 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE6O95741 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE6O95741 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE6O95741 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
CPNE6O95741 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE6O95741 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.97■□□□□ 0.63
CPNE6O95741 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CPNE6O95741 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE6O95741 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.97■□□□□ 0.63
CPNE6O95741 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE6O95741 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CPNE6O95741 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.97■□□□□ 0.63
CPNE6O95741 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE6O95741 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.97■□□□□ 0.63
CPNE6O95741 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.97■□□□□ 0.63
CPNE6O95741 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.97■□□□□ 0.63
CPNE6O95741 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE6O95741 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE6O95741 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE6O95741 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.97■□□□□ 0.63
CPNE6O95741 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE6O95741 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.97■□□□□ 0.63
CPNE6O95741 AP000974.1-201ENST00000623909 2387 ntBASIC18.97■□□□□ 0.63
CPNE6O95741 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE6O95741 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPNE6O95741 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.96■□□□□ 0.63
CPNE6O95741 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPNE6O95741 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.96■□□□□ 0.63
CPNE6O95741 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CPNE6O95741 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CPNE6O95741 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CPNE6O95741 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CPNE6O95741 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.96■□□□□ 0.63
CPNE6O95741 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
CPNE6O95741 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.96■□□□□ 0.63
CPNE6O95741 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPNE6O95741 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CPNE6O95741 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.96■□□□□ 0.63
CPNE6O95741 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CPNE6O95741 FITM1-202ENST00000559294 800 ntBASIC18.96■□□□□ 0.63
CPNE6O95741 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.96■□□□□ 0.63
CPNE6O95741 AL445675.2-201ENST00000620291 557 ntBASIC18.96■□□□□ 0.63
CPNE6O95741 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPNE6O95741 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CPNE6O95741 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPNE6O95741 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CPNE6O95741 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPNE6O95741 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE6O95741 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CPNE6O95741 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.95■□□□□ 0.62
CPNE6O95741 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.95■□□□□ 0.62
CPNE6O95741 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE6O95741 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE6O95741 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE6O95741 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CPNE6O95741 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms