Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX4O95219 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.15■□□□□ 0.5
SNX4O95219 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SNX4O95219 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.15■□□□□ 0.5
SNX4O95219 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SNX4O95219 AC239809.2-201ENST00000415381 517 ntBASIC18.15■□□□□ 0.5
SNX4O95219 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.15■□□□□ 0.5
SNX4O95219 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.15■□□□□ 0.5
SNX4O95219 UBE2SP1-201ENST00000450587 669 ntBASIC18.15■□□□□ 0.5
SNX4O95219 AC133681.1-201ENST00000465482 601 ntBASIC18.15■□□□□ 0.5
SNX4O95219 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.15■□□□□ 0.5
SNX4O95219 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.15■□□□□ 0.5
SNX4O95219 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX4O95219 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX4O95219 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SNX4O95219 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX4O95219 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX4O95219 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX4O95219 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX4O95219 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNX4O95219 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SNX4O95219 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SNX4O95219 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SNX4O95219 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX4O95219 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX4O95219 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SNX4O95219 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SNX4O95219 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.14■□□□□ 0.49
SNX4O95219 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.14■□□□□ 0.49
SNX4O95219 TCF3P1-201ENST00000423021 1937 ntBASIC18.14■□□□□ 0.49
SNX4O95219 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX4O95219 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX4O95219 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX4O95219 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX4O95219 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SNX4O95219 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.14■□□□□ 0.49
SNX4O95219 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.14■□□□□ 0.49
SNX4O95219 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.14■□□□□ 0.49
SNX4O95219 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.14■□□□□ 0.49
SNX4O95219 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
SNX4O95219 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.14■□□□□ 0.49
SNX4O95219 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.14■□□□□ 0.49
SNX4O95219 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX4O95219 AL023875.1-201ENST00000640777 796 ntBASIC18.14■□□□□ 0.49
SNX4O95219 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SNX4O95219 AC120498.9-201ENST00000339021 3867 ntBASIC18.14■□□□□ 0.49
SNX4O95219 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SNX4O95219 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX4O95219 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX4O95219 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SNX4O95219 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
SNX4O95219 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX4O95219 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX4O95219 AC020763.4-201ENST00000623414 4170 ntBASIC18.14■□□□□ 0.49
SNX4O95219 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
SNX4O95219 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.14■□□□□ 0.49
SNX4O95219 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.13■□□□□ 0.49
SNX4O95219 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX4O95219 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
SNX4O95219 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNX4O95219 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
SNX4O95219 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNX4O95219 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX4O95219 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNX4O95219 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.13■□□□□ 0.49
SNX4O95219 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX4O95219 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.13■□□□□ 0.49
SNX4O95219 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNX4O95219 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SNX4O95219 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
SNX4O95219 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX4O95219 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.13■□□□□ 0.49
SNX4O95219 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.13■□□□□ 0.49
SNX4O95219 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNX4O95219 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.13■□□□□ 0.49
SNX4O95219 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.13■□□□□ 0.49
SNX4O95219 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX4O95219 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNX4O95219 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX4O95219 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX4O95219 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX4O95219 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX4O95219 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.13■□□□□ 0.49
SNX4O95219 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX4O95219 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNX4O95219 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX4O95219 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNX4O95219 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNX4O95219 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNX4O95219 AC124283.5-201ENST00000624661 1809 ntBASIC18.12■□□□□ 0.49
SNX4O95219 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SNX4O95219 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNX4O95219 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SNX4O95219 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SNX4O95219 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.12■□□□□ 0.49
SNX4O95219 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.12■□□□□ 0.49
SNX4O95219 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
SNX4O95219 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.12■□□□□ 0.49
SNX4O95219 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.12■□□□□ 0.49
SNX4O95219 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms