Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC26.8■■□□□ 1.88
BRD4O60885 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
BRD4O60885 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
BRD4O60885 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC26.8■■□□□ 1.88
BRD4O60885 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
BRD4O60885 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
BRD4O60885 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC26.8■■□□□ 1.88
BRD4O60885 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC26.8■■□□□ 1.88
BRD4O60885 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
BRD4O60885 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC26.79■■□□□ 1.88
BRD4O60885 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
BRD4O60885 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
BRD4O60885 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC26.79■■□□□ 1.88
BRD4O60885 BX664615.1-201ENST00000443558 458 ntBASIC26.79■■□□□ 1.88
BRD4O60885 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
BRD4O60885 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC26.79■■□□□ 1.88
BRD4O60885 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
BRD4O60885 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
BRD4O60885 AC011298.2-201ENST00000617989 482 ntBASIC26.79■■□□□ 1.88
BRD4O60885 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC26.79■■□□□ 1.88
BRD4O60885 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC26.79■■□□□ 1.88
BRD4O60885 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
BRD4O60885 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC26.79■■□□□ 1.88
BRD4O60885 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
BRD4O60885 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
BRD4O60885 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
BRD4O60885 TREX1-205ENST00000625293 1783 ntBASIC26.78■■□□□ 1.88
BRD4O60885 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
BRD4O60885 ATP5G1P1-201ENST00000448724 379 ntBASIC26.78■■□□□ 1.88
BRD4O60885 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC26.78■■□□□ 1.88
BRD4O60885 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC26.78■■□□□ 1.88
BRD4O60885 WWOX-216ENST00000569818 525 ntBASIC26.78■■□□□ 1.88
BRD4O60885 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
BRD4O60885 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
BRD4O60885 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
BRD4O60885 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC26.78■■□□□ 1.88
BRD4O60885 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
BRD4O60885 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
BRD4O60885 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
BRD4O60885 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
BRD4O60885 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
BRD4O60885 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC26.77■■□□□ 1.88
BRD4O60885 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
BRD4O60885 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC26.77■■□□□ 1.88
BRD4O60885 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
BRD4O60885 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC26.77■■□□□ 1.88
BRD4O60885 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC26.77■■□□□ 1.88
BRD4O60885 SLC25A1P2-201ENST00000430693 912 ntBASIC26.77■■□□□ 1.88
BRD4O60885 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC26.77■■□□□ 1.88
BRD4O60885 AC063952.2-201ENST00000498792 1227 ntBASIC26.77■■□□□ 1.88
BRD4O60885 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
BRD4O60885 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC26.77■■□□□ 1.88
BRD4O60885 AC010653.2-201ENST00000623505 997 ntBASIC26.77■■□□□ 1.88
BRD4O60885 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
BRD4O60885 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
BRD4O60885 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
BRD4O60885 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
BRD4O60885 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
BRD4O60885 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC26.77■■□□□ 1.88
BRD4O60885 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC26.77■■□□□ 1.88
BRD4O60885 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
BRD4O60885 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
BRD4O60885 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
BRD4O60885 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC26.76■■□□□ 1.87
BRD4O60885 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC26.76■■□□□ 1.87
BRD4O60885 AC022616.7-201ENST00000525383 220 ntBASIC26.76■■□□□ 1.87
BRD4O60885 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC26.76■■□□□ 1.87
BRD4O60885 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC26.76■■□□□ 1.87
BRD4O60885 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC26.76■■□□□ 1.87
BRD4O60885 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
BRD4O60885 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC26.76■■□□□ 1.87
BRD4O60885 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
BRD4O60885 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC26.76■■□□□ 1.87
BRD4O60885 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
BRD4O60885 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC26.76■■□□□ 1.87
BRD4O60885 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
BRD4O60885 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.87
BRD4O60885 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
BRD4O60885 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
BRD4O60885 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC26.75■■□□□ 1.87
BRD4O60885 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
BRD4O60885 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC26.75■■□□□ 1.87
BRD4O60885 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC26.75■■□□□ 1.87
BRD4O60885 MYC-208ENST00000641036 567 ntBASIC26.75■■□□□ 1.87
BRD4O60885 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
BRD4O60885 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
BRD4O60885 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
BRD4O60885 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC26.75■■□□□ 1.87
BRD4O60885 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
BRD4O60885 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
BRD4O60885 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
BRD4O60885 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
BRD4O60885 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
BRD4O60885 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
BRD4O60885 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
BRD4O60885 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC26.74■■□□□ 1.87
BRD4O60885 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
BRD4O60885 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC26.74■■□□□ 1.87
BRD4O60885 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC26.74■■□□□ 1.87
BRD4O60885 FAM8A6P-201ENST00000407496 1135 ntBASIC26.74■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms