Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.69□□□□□ -1.66
RAI2Q9Y5P3 AC009094.1-201ENST00000564443 426 ntBASIC4.69□□□□□ -1.66
RAI2Q9Y5P3 MTND4LP24-201ENST00000572277 291 ntBASIC4.69□□□□□ -1.66
RAI2Q9Y5P3 MIR3939-201ENST00000582614 106 ntBASIC4.69□□□□□ -1.66
RAI2Q9Y5P3 AC069366.1-201ENST00000583159 838 ntBASIC4.69□□□□□ -1.66
RAI2Q9Y5P3 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.69□□□□□ -1.66
RAI2Q9Y5P3 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.69□□□□□ -1.66
RAI2Q9Y5P3 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC4.69□□□□□ -1.66
RAI2Q9Y5P3 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.69□□□□□ -1.66
RAI2Q9Y5P3 AC016877.3-201ENST00000606778 504 ntBASIC4.69□□□□□ -1.66
RAI2Q9Y5P3 AC009237.15-201ENST00000610252 501 ntBASIC4.69□□□□□ -1.66
RAI2Q9Y5P3 AC024257.5-201ENST00000612739 531 ntBASIC4.69□□□□□ -1.66
RAI2Q9Y5P3 AL356274.1-201ENST00000617064 410 ntBASIC4.69□□□□□ -1.66
RAI2Q9Y5P3 STMN1P1-201ENST00000617809 440 ntBASIC4.69□□□□□ -1.66
RAI2Q9Y5P3 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.69□□□□□ -1.66
RAI2Q9Y5P3 AC015871.5-202ENST00000623252 701 ntBASIC4.69□□□□□ -1.66
RAI2Q9Y5P3 U3.53-201ENST00000628922 216 ntBASIC4.69□□□□□ -1.66
RAI2Q9Y5P3 AL672167.1-205ENST00000641112 3080 ntBASIC4.69□□□□□ -1.66
RAI2Q9Y5P3 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RAI2Q9Y5P3 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.69□□□□□ -1.66
RAI2Q9Y5P3 CYP1D1P-201ENST00000416662 1433 ntBASIC4.69□□□□□ -1.66
RAI2Q9Y5P3 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.69□□□□□ -1.66
RAI2Q9Y5P3 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
RAI2Q9Y5P3 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RAI2Q9Y5P3 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
RAI2Q9Y5P3 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RAI2Q9Y5P3 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 AC007529.1-201ENST00000418574 2178 ntBASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 ZNF137P-201ENST00000456718 1920 ntBASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 RNA5SP28-201ENST00000363841 119 ntBASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 RN7SKP224-201ENST00000364140 325 ntBASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 Z75741.2-201ENST00000417272 1167 ntBASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 RPL12P34-201ENST00000424532 479 ntBASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 AL358232.1-201ENST00000448030 501 ntBASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 AL122001.1-201ENST00000457027 370 ntBASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 RNU7-27P-201ENST00000459281 62 ntBASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 AC091544.1-201ENST00000484702 348 ntBASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 RPL5P23-201ENST00000496040 868 ntBASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 snoZ278.1-201ENST00000517059 112 ntBASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 MTCO2P15-201ENST00000532655 656 ntBASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 SETP1-201ENST00000556014 845 ntBASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 AC090695.1-201ENST00000561269 1222 ntBASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 AC008088.1-201ENST00000580993 280 ntBASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 MIR548Y-201ENST00000582739 110 ntBASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 RPL12P25-202ENST00000598100 674 ntBASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 AC091057.2-201ENST00000602594 792 ntBASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 AC024220.1-201ENST00000603675 484 ntBASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 AL139344.1-201ENST00000605228 195 ntBASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 AC006133.1-201ENST00000617106 264 ntBASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 AL121594.5-201ENST00000631724 573 ntBASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 AP003399.1-201ENST00000637534 361 ntBASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 LINC02211-204ENST00000642024 1070 ntBASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 AP000756.2-201ENST00000624168 2567 ntBASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RAI2Q9Y5P3 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RAI2Q9Y5P3 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RAI2Q9Y5P3 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.67□□□□□ -1.66
RAI2Q9Y5P3 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RAI2Q9Y5P3 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms