Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 COX6CP15-201ENST00000426313 211 ntBASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 AP000936.3-201ENST00000438127 255 ntBASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 IGKV1OR-3-201ENST00000446944 348 ntBASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 AC022431.1-201ENST00000450941 438 ntBASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 RNU7-152P-201ENST00000458982 64 ntBASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 AC087879.1-201ENST00000474343 374 ntBASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 RPL7AP30-201ENST00000482859 796 ntBASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 AC022415.1-202ENST00000486612 523 ntBASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 LSM3P2-201ENST00000551246 273 ntBASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 SNRPGP18-201ENST00000553000 214 ntBASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 RN7SL131P-201ENST00000579043 256 ntBASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 AC091193.1-201ENST00000604640 448 ntBASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 AC015908.5-201ENST00000623289 343 ntBASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 AC009902.3-201ENST00000606235 2172 ntBASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 AL022323.4-201ENST00000623980 13120 ntBASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 AC091305.2-201ENST00000624049 1576 ntBASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 Y_RNA.187-201ENST00000363918 113 ntBASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 Y_RNA.414-201ENST00000384011 101 ntBASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 RNU1-46P-201ENST00000384425 164 ntBASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 MIR558-201ENST00000384920 94 ntBASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 AL136100.1-201ENST00000407696 330 ntBASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 RNU2-29P-201ENST00000410423 189 ntBASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 RN7SKP91-201ENST00000410852 288 ntBASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 OR6C66P-201ENST00000414917 930 ntBASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 AL672212.1-201ENST00000422246 400 ntBASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 AC000089.1-201ENST00000424559 801 ntBASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 AC108059.3-201ENST00000456388 214 ntBASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 PLGLA-201ENST00000465668 449 ntBASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 RPL7L1P8-201ENST00000469911 741 ntBASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 AC021382.1-201ENST00000483523 359 ntBASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 B3GNTL1P1-201ENST00000509174 289 ntBASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 AL390198.2-201ENST00000510553 222 ntBASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 RPL39P5-202ENST00000512505 151 ntBASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 RNU6-864P-201ENST00000516256 108 ntBASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 Y_RNA.720-201ENST00000517166 92 ntBASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 AC100784.1-201ENST00000522790 310 ntBASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 PHBP2-201ENST00000532859 806 ntBASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 AL163153.1-201ENST00000554223 283 ntBASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 DNAJC8P1-201ENST00000554535 372 ntBASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 MIR4504-201ENST00000577413 92 ntBASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 AC245389.1-201ENST00000605141 529 ntBASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 AC091925.1-201ENST00000623204 462 ntBASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 AC005858.3-201ENST00000624756 589 ntBASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 CASC19-228ENST00000641414 1684 ntBASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 AL512353.3-201ENST00000417517 1326 ntBASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 SSXP3-201ENST00000442971 1300 ntBASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms