Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 FO082796.1-201ENST00000523795 183 ntBASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 AC087276.1-201ENST00000529659 480 ntBASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 AP001858.2-201ENST00000536213 601 ntBASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 AC137768.1-201ENST00000549998 553 ntBASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 AC044913.1-201ENST00000557200 430 ntBASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 AC053481.3-201ENST00000577881 843 ntBASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 SNORD95-201ENST00000579879 68 ntBASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 AP005119.1-201ENST00000580956 292 ntBASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 AP001542.2-201ENST00000593141 364 ntBASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 AC018695.5-201ENST00000605872 315 ntBASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 AL161901.1-201ENST00000624954 3425 ntBASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 SAMMSON-213ENST00000641336 1521 ntBASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC7.77□□□□□ -1.16
PDZRN3Q9UPQ7 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.16
PDZRN3Q9UPQ7 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC7.77□□□□□ -1.17
PDZRN3Q9UPQ7 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
PDZRN3Q9UPQ7 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
PDZRN3Q9UPQ7 MTND5P7-201ENST00000413558 1798 ntBASIC7.77□□□□□ -1.17
PDZRN3Q9UPQ7 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC7.77□□□□□ -1.17
PDZRN3Q9UPQ7 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC7.77□□□□□ -1.17
PDZRN3Q9UPQ7 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
PDZRN3Q9UPQ7 RNU1-150P-201ENST00000362491 162 ntBASIC7.77□□□□□ -1.17
PDZRN3Q9UPQ7 RNU1-49P-201ENST00000363468 159 ntBASIC7.77□□□□□ -1.17
PDZRN3Q9UPQ7 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
PDZRN3Q9UPQ7 RN7SKP151-201ENST00000410230 316 ntBASIC7.77□□□□□ -1.17
PDZRN3Q9UPQ7 RNU6-1148P-201ENST00000410992 104 ntBASIC7.77□□□□□ -1.17
PDZRN3Q9UPQ7 MRPL50P2-201ENST00000416821 482 ntBASIC7.77□□□□□ -1.17
PDZRN3Q9UPQ7 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC7.77□□□□□ -1.17
PDZRN3Q9UPQ7 TUBB4BP6-201ENST00000437576 479 ntBASIC7.77□□□□□ -1.17
PDZRN3Q9UPQ7 AL512605.1-202ENST00000441919 381 ntBASIC7.77□□□□□ -1.17
PDZRN3Q9UPQ7 AL359955.2-201ENST00000445380 353 ntBASIC7.77□□□□□ -1.17
PDZRN3Q9UPQ7 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
PDZRN3Q9UPQ7 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC7.77□□□□□ -1.17
PDZRN3Q9UPQ7 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC7.77□□□□□ -1.17
PDZRN3Q9UPQ7 RANP2-201ENST00000456833 229 ntBASIC7.77□□□□□ -1.17
PDZRN3Q9UPQ7 AC110749.1-201ENST00000462007 357 ntBASIC7.77□□□□□ -1.17
PDZRN3Q9UPQ7 AL122020.1-201ENST00000472287 459 ntBASIC7.77□□□□□ -1.17
PDZRN3Q9UPQ7 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC7.77□□□□□ -1.17
PDZRN3Q9UPQ7 RNU6-559P-201ENST00000516151 98 ntBASIC7.77□□□□□ -1.17
PDZRN3Q9UPQ7 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
PDZRN3Q9UPQ7 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC7.77□□□□□ -1.17
PDZRN3Q9UPQ7 AL163153.1-201ENST00000554223 283 ntBASIC7.77□□□□□ -1.17
PDZRN3Q9UPQ7 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC7.77□□□□□ -1.17
PDZRN3Q9UPQ7 MIR4742-201ENST00000581069 85 ntBASIC7.77□□□□□ -1.17
PDZRN3Q9UPQ7 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC7.77□□□□□ -1.17
PDZRN3Q9UPQ7 AL136131.3-201ENST00000607600 188 ntBASIC7.77□□□□□ -1.17
PDZRN3Q9UPQ7 RN7SL787P-201ENST00000613000 284 ntBASIC7.77□□□□□ -1.17
PDZRN3Q9UPQ7 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
PDZRN3Q9UPQ7 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
PDZRN3Q9UPQ7 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
PDZRN3Q9UPQ7 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
PDZRN3Q9UPQ7 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
PDZRN3Q9UPQ7 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
PDZRN3Q9UPQ7 AC024651.2-201ENST00000562480 2098 ntBASIC7.77□□□□□ -1.17
PDZRN3Q9UPQ7 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC7.77□□□□□ -1.17
PDZRN3Q9UPQ7 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC7.77□□□□□ -1.17
PDZRN3Q9UPQ7 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 Y_RNA.158-201ENST00000363651 101 ntBASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 Y_RNA.556-201ENST00000384677 113 ntBASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 Y_RNA.574-201ENST00000384766 95 ntBASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 AC017078.1-201ENST00000416146 368 ntBASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 AC093698.1-201ENST00000423843 571 ntBASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 DYNLL1P7-201ENST00000429273 258 ntBASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 MTCO1P54-201ENST00000430139 712 ntBASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 AL513175.1-201ENST00000431492 780 ntBASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 AL049734.2-201ENST00000441066 616 ntBASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 FAM103A2P-201ENST00000444122 354 ntBASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 AL163193.1-201ENST00000444895 788 ntBASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 HCG14-201ENST00000444986 413 ntTSL 2 BASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 GAS5-218ENST00000448718 565 ntTSL 2 BASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 RPL7P52-201ENST00000449200 742 ntBASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 AL445687.2-201ENST00000458156 728 ntBASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 APOOP2-201ENST00000461561 539 ntBASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC7.76□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms