Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 OR8I1P-201ENST00000529291 931 ntBASIC4.61□□□□□ -1.67
SIX4Q9UIU6 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SIX4Q9UIU6 AC006064.5-201ENST00000541782 248 ntBASIC4.61□□□□□ -1.67
SIX4Q9UIU6 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.61□□□□□ -1.67
SIX4Q9UIU6 AC087897.1-201ENST00000550134 156 ntBASIC4.61□□□□□ -1.67
SIX4Q9UIU6 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.61□□□□□ -1.67
SIX4Q9UIU6 SULT1C2P2-201ENST00000562517 294 ntBASIC4.61□□□□□ -1.67
SIX4Q9UIU6 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.61□□□□□ -1.67
SIX4Q9UIU6 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.61□□□□□ -1.67
SIX4Q9UIU6 AC245036.5-201ENST00000596330 847 ntBASIC4.61□□□□□ -1.67
SIX4Q9UIU6 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SIX4Q9UIU6 AP002906.1-201ENST00000603405 233 ntBASIC4.61□□□□□ -1.67
SIX4Q9UIU6 AL161729.3-201ENST00000603533 673 ntBASIC4.61□□□□□ -1.67
SIX4Q9UIU6 AL590392.1-201ENST00000604960 446 ntBASIC4.61□□□□□ -1.67
SIX4Q9UIU6 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.61□□□□□ -1.67
SIX4Q9UIU6 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.61□□□□□ -1.67
SIX4Q9UIU6 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.61□□□□□ -1.67
SIX4Q9UIU6 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.61□□□□□ -1.67
SIX4Q9UIU6 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.61□□□□□ -1.67
SIX4Q9UIU6 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
SIX4Q9UIU6 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
SIX4Q9UIU6 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SIX4Q9UIU6 DDX18P3-201ENST00000404856 2007 ntBASIC4.6□□□□□ -1.67
SIX4Q9UIU6 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SIX4Q9UIU6 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.6□□□□□ -1.67
SIX4Q9UIU6 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.6□□□□□ -1.67
SIX4Q9UIU6 NEAT1-202ENST00000501122 22743 ntBASIC4.6□□□□□ -1.67
SIX4Q9UIU6 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.6□□□□□ -1.67
SIX4Q9UIU6 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SIX4Q9UIU6 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SIX4Q9UIU6 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.6□□□□□ -1.67
SIX4Q9UIU6 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
SIX4Q9UIU6 MIR513B-201ENST00000385136 84 ntBASIC4.6□□□□□ -1.67
SIX4Q9UIU6 RPL7P27-201ENST00000403775 720 ntBASIC4.6□□□□□ -1.67
SIX4Q9UIU6 RPL6P29-201ENST00000414863 865 ntBASIC4.6□□□□□ -1.67
SIX4Q9UIU6 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.6□□□□□ -1.67
SIX4Q9UIU6 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.6□□□□□ -1.67
SIX4Q9UIU6 RPL23AP4-201ENST00000427757 463 ntBASIC4.6□□□□□ -1.67
SIX4Q9UIU6 GTF2IP3-201ENST00000433887 494 ntBASIC4.6□□□□□ -1.67
SIX4Q9UIU6 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.6□□□□□ -1.67
SIX4Q9UIU6 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.6□□□□□ -1.67
SIX4Q9UIU6 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.6□□□□□ -1.67
SIX4Q9UIU6 NPM1P33-201ENST00000438918 872 ntBASIC4.6□□□□□ -1.67
SIX4Q9UIU6 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.6□□□□□ -1.67
SIX4Q9UIU6 VN1R25P-201ENST00000443385 738 ntBASIC4.6□□□□□ -1.67
SIX4Q9UIU6 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.6□□□□□ -1.67
SIX4Q9UIU6 SEPT14P24-201ENST00000447236 180 ntBASIC4.6□□□□□ -1.67
SIX4Q9UIU6 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.6□□□□□ -1.67
SIX4Q9UIU6 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.6□□□□□ -1.67
SIX4Q9UIU6 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.6□□□□□ -1.67
SIX4Q9UIU6 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.6□□□□□ -1.67
SIX4Q9UIU6 UQCRHP4-201ENST00000471686 272 ntBASIC4.6□□□□□ -1.67
SIX4Q9UIU6 AC012158.1-204ENST00000483430 465 ntBASIC4.6□□□□□ -1.67
SIX4Q9UIU6 AC105137.1-201ENST00000484355 562 ntBASIC4.6□□□□□ -1.67
SIX4Q9UIU6 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.6□□□□□ -1.67
SIX4Q9UIU6 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.6□□□□□ -1.67
SIX4Q9UIU6 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.6□□□□□ -1.67
SIX4Q9UIU6 AL592156.1-201ENST00000508758 304 ntBASIC4.6□□□□□ -1.67
SIX4Q9UIU6 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SIX4Q9UIU6 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.6□□□□□ -1.67
SIX4Q9UIU6 RNA5SP73-201ENST00000516744 108 ntBASIC4.6□□□□□ -1.67
SIX4Q9UIU6 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.6□□□□□ -1.67
SIX4Q9UIU6 VBP1-203ENST00000535916 944 ntTSL 2 BASIC4.6□□□□□ -1.67
SIX4Q9UIU6 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.6□□□□□ -1.67
SIX4Q9UIU6 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC4.6□□□□□ -1.67
SIX4Q9UIU6 AL109741.3-201ENST00000561748 592 ntBASIC4.6□□□□□ -1.67
SIX4Q9UIU6 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.6□□□□□ -1.67
SIX4Q9UIU6 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SIX4Q9UIU6 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC4.6□□□□□ -1.67
SIX4Q9UIU6 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.6□□□□□ -1.67
SIX4Q9UIU6 AC113368.1-201ENST00000603736 382 ntBASIC4.6□□□□□ -1.67
SIX4Q9UIU6 ARF4P1-201ENST00000605447 541 ntBASIC4.6□□□□□ -1.67
SIX4Q9UIU6 AC024060.1-201ENST00000607052 494 ntBASIC4.6□□□□□ -1.67
SIX4Q9UIU6 OR2BH1P-201ENST00000608850 864 ntBASIC4.6□□□□□ -1.67
SIX4Q9UIU6 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
SIX4Q9UIU6 FAM27D1-201ENST00000612308 341 ntBASIC4.6□□□□□ -1.67
SIX4Q9UIU6 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.6□□□□□ -1.67
SIX4Q9UIU6 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.6□□□□□ -1.67
SIX4Q9UIU6 AC019278.1-201ENST00000623516 479 ntBASIC4.6□□□□□ -1.67
SIX4Q9UIU6 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
SIX4Q9UIU6 AC093535.2-201ENST00000624769 2326 ntBASIC4.6□□□□□ -1.67
SIX4Q9UIU6 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SIX4Q9UIU6 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
SIX4Q9UIU6 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
SIX4Q9UIU6 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.59□□□□□ -1.67
SIX4Q9UIU6 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SIX4Q9UIU6 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
SIX4Q9UIU6 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
SIX4Q9UIU6 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
SIX4Q9UIU6 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
SIX4Q9UIU6 RNA5SP372-201ENST00000390836 115 ntBASIC4.59□□□□□ -1.67
SIX4Q9UIU6 RNU4-22P-201ENST00000411058 166 ntBASIC4.59□□□□□ -1.67
SIX4Q9UIU6 RAB28P1-201ENST00000411517 641 ntBASIC4.59□□□□□ -1.67
SIX4Q9UIU6 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.59□□□□□ -1.67
SIX4Q9UIU6 HMGB3P31-201ENST00000413333 595 ntBASIC4.59□□□□□ -1.67
SIX4Q9UIU6 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.59□□□□□ -1.67
SIX4Q9UIU6 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.59□□□□□ -1.67
SIX4Q9UIU6 MTCO2P21-201ENST00000419780 677 ntBASIC4.59□□□□□ -1.67
SIX4Q9UIU6 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.59□□□□□ -1.67
SIX4Q9UIU6 AL450326.2-201ENST00000421913 1962 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms