Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SCN11AQ9UI33 OR51C1P-202ENST00000641159 1444 ntBASIC4.63□□□□□ -1.67
SCN11AQ9UI33 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
SCN11AQ9UI33 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.63□□□□□ -1.67
SCN11AQ9UI33 AC005326.1-201ENST00000429197 123 ntBASIC4.63□□□□□ -1.67
SCN11AQ9UI33 RPS4XP2-201ENST00000458402 793 ntBASIC4.63□□□□□ -1.67
SCN11AQ9UI33 AC025445.1-201ENST00000502728 300 ntBASIC4.63□□□□□ -1.67
SCN11AQ9UI33 FTH1P24-201ENST00000503502 462 ntBASIC4.63□□□□□ -1.67
SCN11AQ9UI33 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.63□□□□□ -1.67
SCN11AQ9UI33 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SCN11AQ9UI33 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.63□□□□□ -1.67
SCN11AQ9UI33 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.63□□□□□ -1.67
SCN11AQ9UI33 AP006245.1-201ENST00000522549 120 ntBASIC4.63□□□□□ -1.67
SCN11AQ9UI33 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.63□□□□□ -1.67
SCN11AQ9UI33 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SCN11AQ9UI33 AC115621.1-201ENST00000604653 858 ntBASIC4.63□□□□□ -1.67
SCN11AQ9UI33 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.63□□□□□ -1.67
SCN11AQ9UI33 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.63□□□□□ -1.67
SCN11AQ9UI33 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
SCN11AQ9UI33 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
SCN11AQ9UI33 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SCN11AQ9UI33 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SCN11AQ9UI33 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SCN11AQ9UI33 SNORD74.4-201ENST00000364129 80 ntBASIC4.63□□□□□ -1.67
SCN11AQ9UI33 RNA5SP42-201ENST00000364278 115 ntBASIC4.63□□□□□ -1.67
SCN11AQ9UI33 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.63□□□□□ -1.67
SCN11AQ9UI33 CBX1P3-201ENST00000413296 527 ntBASIC4.63□□□□□ -1.67
SCN11AQ9UI33 AL391219.1-201ENST00000422570 483 ntBASIC4.63□□□□□ -1.67
SCN11AQ9UI33 HIGD1AP12-201ENST00000427832 281 ntBASIC4.63□□□□□ -1.67
SCN11AQ9UI33 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.63□□□□□ -1.67
SCN11AQ9UI33 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.63□□□□□ -1.67
SCN11AQ9UI33 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.63□□□□□ -1.67
SCN11AQ9UI33 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.63□□□□□ -1.67
SCN11AQ9UI33 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.62□□□□□ -1.67
SCN11AQ9UI33 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SCN11AQ9UI33 SAGE2P-201ENST00000420011 2126 ntBASIC4.62□□□□□ -1.67
SCN11AQ9UI33 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SCN11AQ9UI33 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.62□□□□□ -1.67
SCN11AQ9UI33 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SCN11AQ9UI33 FRG1CP-201ENST00000358464 769 ntBASIC4.62□□□□□ -1.67
SCN11AQ9UI33 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.62□□□□□ -1.67
SCN11AQ9UI33 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.62□□□□□ -1.67
SCN11AQ9UI33 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.62□□□□□ -1.67
SCN11AQ9UI33 MOB1AP1-201ENST00000430903 535 ntBASIC4.62□□□□□ -1.67
SCN11AQ9UI33 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.62□□□□□ -1.67
SCN11AQ9UI33 AC127537.2-201ENST00000439258 465 ntBASIC4.62□□□□□ -1.67
SCN11AQ9UI33 RPSAP41-201ENST00000439695 860 ntBASIC4.62□□□□□ -1.67
SCN11AQ9UI33 RPS15AP29-201ENST00000445539 400 ntBASIC4.62□□□□□ -1.67
SCN11AQ9UI33 NPM1P29-201ENST00000483112 803 ntBASIC4.62□□□□□ -1.67
SCN11AQ9UI33 RPS26P15-201ENST00000488067 348 ntBASIC4.62□□□□□ -1.67
SCN11AQ9UI33 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.62□□□□□ -1.67
SCN11AQ9UI33 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.62□□□□□ -1.67
SCN11AQ9UI33 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.62□□□□□ -1.67
SCN11AQ9UI33 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SCN11AQ9UI33 SULT1C2P2-201ENST00000562517 294 ntBASIC4.62□□□□□ -1.67
SCN11AQ9UI33 AC006116.10-201ENST00000591836 581 ntBASIC4.62□□□□□ -1.67
SCN11AQ9UI33 MIR8057-201ENST00000620957 69 ntBASIC4.62□□□□□ -1.67
SCN11AQ9UI33 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.62□□□□□ -1.67
SCN11AQ9UI33 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.62□□□□□ -1.67
SCN11AQ9UI33 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.61□□□□□ -1.67
SCN11AQ9UI33 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
SCN11AQ9UI33 RPL21P109-201ENST00000422213 475 ntBASIC4.61□□□□□ -1.67
SCN11AQ9UI33 NDUFB1P1-201ENST00000435191 180 ntBASIC4.61□□□□□ -1.67
SCN11AQ9UI33 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.61□□□□□ -1.67
SCN11AQ9UI33 AC073587.1-201ENST00000447093 876 ntBASIC4.61□□□□□ -1.67
SCN11AQ9UI33 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.61□□□□□ -1.67
SCN11AQ9UI33 AC010285.3-201ENST00000511668 676 ntBASIC4.61□□□□□ -1.67
SCN11AQ9UI33 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.61□□□□□ -1.67
SCN11AQ9UI33 RNA5SP154-201ENST00000516193 111 ntBASIC4.61□□□□□ -1.67
SCN11AQ9UI33 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SCN11AQ9UI33 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.61□□□□□ -1.67
SCN11AQ9UI33 AL513477.2-201ENST00000607858 568 ntBASIC4.61□□□□□ -1.67
SCN11AQ9UI33 AC127502.3-201ENST00000636170 1206 ntBASIC4.61□□□□□ -1.67
SCN11AQ9UI33 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC4.61□□□□□ -1.67
SCN11AQ9UI33 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.61□□□□□ -1.67
SCN11AQ9UI33 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SCN11AQ9UI33 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SCN11AQ9UI33 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SCN11AQ9UI33 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.61□□□□□ -1.67
SCN11AQ9UI33 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SCN11AQ9UI33 AC234772.1-201ENST00000377927 937 ntBASIC4.6□□□□□ -1.67
SCN11AQ9UI33 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
SCN11AQ9UI33 MIR1289-1-201ENST00000408836 144 ntBASIC4.6□□□□□ -1.67
SCN11AQ9UI33 AL512649.1-201ENST00000428997 581 ntBASIC4.6□□□□□ -1.67
SCN11AQ9UI33 BTF3P5-201ENST00000457252 467 ntBASIC4.6□□□□□ -1.67
SCN11AQ9UI33 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.6□□□□□ -1.67
SCN11AQ9UI33 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.6□□□□□ -1.67
SCN11AQ9UI33 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.6□□□□□ -1.67
SCN11AQ9UI33 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.6□□□□□ -1.67
SCN11AQ9UI33 AL078595.2-201ENST00000605309 1780 ntBASIC4.6□□□□□ -1.67
SCN11AQ9UI33 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SCN11AQ9UI33 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.6□□□□□ -1.67
SCN11AQ9UI33 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SCN11AQ9UI33 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.6□□□□□ -1.67
SCN11AQ9UI33 AC010300.1-201ENST00000600671 5134 ntBASIC4.6□□□□□ -1.67
SCN11AQ9UI33 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.6□□□□□ -1.67
SCN11AQ9UI33 AC019072.1-201ENST00000604535 1551 ntBASIC4.6□□□□□ -1.67
SCN11AQ9UI33 AC139426.3-201ENST00000605648 2059 ntBASIC4.6□□□□□ -1.67
SCN11AQ9UI33 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
SCN11AQ9UI33 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms