Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC7□□□□□ -1.29
LIMD1Q9UGP4 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC7□□□□□ -1.29
LIMD1Q9UGP4 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC7□□□□□ -1.29
LIMD1Q9UGP4 MTND5P28-201ENST00000438005 1594 ntBASIC7□□□□□ -1.29
LIMD1Q9UGP4 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
LIMD1Q9UGP4 AC007342.5-201ENST00000571340 2142 ntBASIC7□□□□□ -1.29
LIMD1Q9UGP4 AC104966.1-201ENST00000467010 1464 ntBASIC7□□□□□ -1.29
LIMD1Q9UGP4 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
LIMD1Q9UGP4 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
LIMD1Q9UGP4 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
LIMD1Q9UGP4 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
LIMD1Q9UGP4 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC7□□□□□ -1.29
LIMD1Q9UGP4 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC7□□□□□ -1.29
LIMD1Q9UGP4 RN7SKP275-201ENST00000364626 301 ntBASIC7□□□□□ -1.29
LIMD1Q9UGP4 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC7□□□□□ -1.29
LIMD1Q9UGP4 RNU6-641P-201ENST00000384006 107 ntBASIC7□□□□□ -1.29
LIMD1Q9UGP4 MIR188-201ENST00000385034 86 ntBASIC7□□□□□ -1.29
LIMD1Q9UGP4 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC7□□□□□ -1.29
LIMD1Q9UGP4 AL359694.1-201ENST00000403247 604 ntBASIC7□□□□□ -1.29
LIMD1Q9UGP4 RNA5SP198-201ENST00000410376 127 ntBASIC7□□□□□ -1.29
LIMD1Q9UGP4 RN7SKP58-201ENST00000411010 305 ntBASIC7□□□□□ -1.29
LIMD1Q9UGP4 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC7□□□□□ -1.29
LIMD1Q9UGP4 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
LIMD1Q9UGP4 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
LIMD1Q9UGP4 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC7□□□□□ -1.29
LIMD1Q9UGP4 TXNP1-201ENST00000441872 371 ntBASIC7□□□□□ -1.29
LIMD1Q9UGP4 ELOCP24-201ENST00000456370 334 ntBASIC7□□□□□ -1.29
LIMD1Q9UGP4 UBFD1P1-201ENST00000473259 814 ntBASIC7□□□□□ -1.29
LIMD1Q9UGP4 RPL7AP23-201ENST00000482625 776 ntBASIC7□□□□□ -1.29
LIMD1Q9UGP4 AL049874.2-201ENST00000492636 288 ntBASIC7□□□□□ -1.29
LIMD1Q9UGP4 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC7□□□□□ -1.29
LIMD1Q9UGP4 AC092436.1-201ENST00000506450 503 ntBASIC7□□□□□ -1.29
LIMD1Q9UGP4 MTCYBP40-201ENST00000509390 1135 ntBASIC7□□□□□ -1.29
LIMD1Q9UGP4 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC7□□□□□ -1.29
LIMD1Q9UGP4 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC7□□□□□ -1.29
LIMD1Q9UGP4 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC7□□□□□ -1.29
LIMD1Q9UGP4 MDM2-233ENST00000545204 398 ntTSL 5 BASIC7□□□□□ -1.29
LIMD1Q9UGP4 AC026956.1-201ENST00000558741 396 ntBASIC7□□□□□ -1.29
LIMD1Q9UGP4 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC7□□□□□ -1.29
LIMD1Q9UGP4 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC7□□□□□ -1.29
LIMD1Q9UGP4 MIR4703-201ENST00000577728 79 ntBASIC7□□□□□ -1.29
LIMD1Q9UGP4 COX6CP3-201ENST00000580869 223 ntBASIC7□□□□□ -1.29
LIMD1Q9UGP4 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC7□□□□□ -1.29
LIMD1Q9UGP4 MIR3942-201ENST00000585264 109 ntBASIC7□□□□□ -1.29
LIMD1Q9UGP4 AL513327.3-201ENST00000602618 469 ntBASIC7□□□□□ -1.29
LIMD1Q9UGP4 AC092807.2-201ENST00000609367 243 ntBASIC7□□□□□ -1.29
LIMD1Q9UGP4 AC103710.2-201ENST00000609912 942 ntBASIC7□□□□□ -1.29
LIMD1Q9UGP4 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
LIMD1Q9UGP4 AC022418.1-201ENST00000624118 445 ntBASIC7□□□□□ -1.29
LIMD1Q9UGP4 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC7□□□□□ -1.29
LIMD1Q9UGP4 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
LIMD1Q9UGP4 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
LIMD1Q9UGP4 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC7□□□□□ -1.29
LIMD1Q9UGP4 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
LIMD1Q9UGP4 BTK-209ENST00000618050 2417 ntTSL 5 BASIC7□□□□□ -1.29
LIMD1Q9UGP4 AC092079.1-201ENST00000558620 1985 ntBASIC7□□□□□ -1.29
LIMD1Q9UGP4 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
LIMD1Q9UGP4 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC7□□□□□ -1.29
LIMD1Q9UGP4 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC7□□□□□ -1.29
LIMD1Q9UGP4 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC7□□□□□ -1.29
LIMD1Q9UGP4 DMD-211ENST00000378707 7410 ntTSL 5 BASIC7□□□□□ -1.29
LIMD1Q9UGP4 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC7□□□□□ -1.29
LIMD1Q9UGP4 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC7□□□□□ -1.29
LIMD1Q9UGP4 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
LIMD1Q9UGP4 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC7□□□□□ -1.29
LIMD1Q9UGP4 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
LIMD1Q9UGP4 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC7□□□□□ -1.29
LIMD1Q9UGP4 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC7□□□□□ -1.29
LIMD1Q9UGP4 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC7□□□□□ -1.29
LIMD1Q9UGP4 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
LIMD1Q9UGP4 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC7□□□□□ -1.29
LIMD1Q9UGP4 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 AC009237.3-203ENST00000442128 3551 ntBASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 SLC2A3P1-201ENST00000519666 1451 ntBASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 RNU6-1029P-201ENST00000384109 107 ntBASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 MT-TG-201ENST00000387429 68 ntBASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 RNU6-308P-201ENST00000390957 107 ntBASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 RN7SKP247-201ENST00000411094 308 ntBASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 RPSAP35-201ENST00000413753 818 ntBASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 AC068533.1-201ENST00000418542 415 ntBASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 BRWD1P3-201ENST00000428816 390 ntBASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 SUMO2P3-201ENST00000438311 288 ntBASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 UBBP5-201ENST00000446970 266 ntBASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 AC104073.1-201ENST00000451988 151 ntBASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 MTND1P9-201ENST00000453775 944 ntBASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 AC104308.1-201ENST00000454621 333 ntBASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms