Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.11□□□□□ -1.59
DKK3Q9UBP4 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.11□□□□□ -1.59
DKK3Q9UBP4 FTH1P16-201ENST00000435241 552 ntBASIC5.11□□□□□ -1.59
DKK3Q9UBP4 MTCO2P16-201ENST00000436962 677 ntBASIC5.11□□□□□ -1.59
DKK3Q9UBP4 AL354941.1-201ENST00000438600 464 ntBASIC5.11□□□□□ -1.59
DKK3Q9UBP4 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.11□□□□□ -1.59
DKK3Q9UBP4 AL138878.2-201ENST00000440581 1241 ntBASIC5.11□□□□□ -1.59
DKK3Q9UBP4 RPL34P20-201ENST00000442771 351 ntBASIC5.11□□□□□ -1.59
DKK3Q9UBP4 CEACAMP9-201ENST00000442990 513 ntBASIC5.11□□□□□ -1.59
DKK3Q9UBP4 OR7E125P-201ENST00000443450 846 ntBASIC5.11□□□□□ -1.59
DKK3Q9UBP4 AL929288.2-201ENST00000446368 407 ntBASIC5.11□□□□□ -1.59
DKK3Q9UBP4 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.11□□□□□ -1.59
DKK3Q9UBP4 RPL5P30-201ENST00000465511 891 ntBASIC5.11□□□□□ -1.59
DKK3Q9UBP4 RN7SL441P-201ENST00000492388 296 ntBASIC5.11□□□□□ -1.59
DKK3Q9UBP4 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.11□□□□□ -1.59
DKK3Q9UBP4 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC5.11□□□□□ -1.59
DKK3Q9UBP4 MTND3P5-201ENST00000512798 333 ntBASIC5.11□□□□□ -1.59
DKK3Q9UBP4 AC023632.1-201ENST00000518463 375 ntBASIC5.11□□□□□ -1.59
DKK3Q9UBP4 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.11□□□□□ -1.59
DKK3Q9UBP4 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.11□□□□□ -1.59
DKK3Q9UBP4 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC5.11□□□□□ -1.59
DKK3Q9UBP4 OR5AZ1P-201ENST00000527448 943 ntBASIC5.11□□□□□ -1.59
DKK3Q9UBP4 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.11□□□□□ -1.59
DKK3Q9UBP4 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.11□□□□□ -1.59
DKK3Q9UBP4 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.11□□□□□ -1.59
DKK3Q9UBP4 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.11□□□□□ -1.59
DKK3Q9UBP4 ISCA1P3-201ENST00000577104 373 ntBASIC5.11□□□□□ -1.59
DKK3Q9UBP4 AC022884.2-201ENST00000578535 580 ntBASIC5.11□□□□□ -1.59
DKK3Q9UBP4 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC5.11□□□□□ -1.59
DKK3Q9UBP4 SS18L2P2-201ENST00000583960 235 ntBASIC5.11□□□□□ -1.59
DKK3Q9UBP4 AC105254.2-201ENST00000603636 436 ntBASIC5.11□□□□□ -1.59
DKK3Q9UBP4 AP000811.1-201ENST00000603803 651 ntBASIC5.11□□□□□ -1.59
DKK3Q9UBP4 AC087283.1-201ENST00000604029 1074 ntBASIC5.11□□□□□ -1.59
DKK3Q9UBP4 AP000238.1-201ENST00000608759 426 ntBASIC5.11□□□□□ -1.59
DKK3Q9UBP4 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.11□□□□□ -1.59
DKK3Q9UBP4 AP000346.3-201ENST00000622821 210 ntBASIC5.11□□□□□ -1.59
DKK3Q9UBP4 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.11□□□□□ -1.59
DKK3Q9UBP4 AC091905.4-201ENST00000623432 202 ntBASIC5.11□□□□□ -1.59
DKK3Q9UBP4 U6.107-201ENST00000637108 79 ntBASIC5.11□□□□□ -1.59
DKK3Q9UBP4 FP325313.1-201ENST00000638228 703 ntBASIC5.11□□□□□ -1.59
DKK3Q9UBP4 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.11□□□□□ -1.59
DKK3Q9UBP4 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
DKK3Q9UBP4 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.11□□□□□ -1.59
DKK3Q9UBP4 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.11□□□□□ -1.59
DKK3Q9UBP4 AL390237.1-201ENST00000404226 1415 ntBASIC5.11□□□□□ -1.59
DKK3Q9UBP4 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
DKK3Q9UBP4 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.11□□□□□ -1.59
DKK3Q9UBP4 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
DKK3Q9UBP4 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.11□□□□□ -1.59
DKK3Q9UBP4 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.11□□□□□ -1.59
DKK3Q9UBP4 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.11□□□□□ -1.59
DKK3Q9UBP4 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.11□□□□□ -1.59
DKK3Q9UBP4 INTS6P1-201ENST00000504674 2530 ntBASIC5.11□□□□□ -1.59
DKK3Q9UBP4 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
DKK3Q9UBP4 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.1□□□□□ -1.59
DKK3Q9UBP4 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
DKK3Q9UBP4 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
DKK3Q9UBP4 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
DKK3Q9UBP4 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
DKK3Q9UBP4 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
DKK3Q9UBP4 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
DKK3Q9UBP4 RNU6-532P-201ENST00000384318 107 ntBASIC5.1□□□□□ -1.59
DKK3Q9UBP4 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
DKK3Q9UBP4 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.1□□□□□ -1.59
DKK3Q9UBP4 RNU6-603P-201ENST00000411403 107 ntBASIC5.1□□□□□ -1.59
DKK3Q9UBP4 PAICSP7-201ENST00000419829 962 ntBASIC5.1□□□□□ -1.59
DKK3Q9UBP4 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC5.1□□□□□ -1.59
DKK3Q9UBP4 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC5.1□□□□□ -1.59
DKK3Q9UBP4 RPS3AP44-201ENST00000425466 790 ntBASIC5.1□□□□□ -1.59
DKK3Q9UBP4 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC5.1□□□□□ -1.59
DKK3Q9UBP4 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.1□□□□□ -1.59
DKK3Q9UBP4 BX323845.1-201ENST00000432417 179 ntBASIC5.1□□□□□ -1.59
DKK3Q9UBP4 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.1□□□□□ -1.59
DKK3Q9UBP4 AC129850.1-201ENST00000436203 508 ntBASIC5.1□□□□□ -1.59
DKK3Q9UBP4 AC234064.1-201ENST00000436312 247 ntBASIC5.1□□□□□ -1.59
DKK3Q9UBP4 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC5.1□□□□□ -1.59
DKK3Q9UBP4 MTND4P4-201ENST00000439033 1366 ntBASIC5.1□□□□□ -1.59
DKK3Q9UBP4 Z80107.2-201ENST00000445127 392 ntBASIC5.1□□□□□ -1.59
DKK3Q9UBP4 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.1□□□□□ -1.59
DKK3Q9UBP4 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC5.1□□□□□ -1.59
DKK3Q9UBP4 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
DKK3Q9UBP4 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
DKK3Q9UBP4 AC021205.1-201ENST00000468797 348 ntBASIC5.1□□□□□ -1.59
DKK3Q9UBP4 RPL30P6-201ENST00000475925 342 ntBASIC5.1□□□□□ -1.59
DKK3Q9UBP4 AC080014.1-201ENST00000496877 1201 ntBASIC5.1□□□□□ -1.59
DKK3Q9UBP4 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
DKK3Q9UBP4 AC073358.1-201ENST00000505671 684 ntBASIC5.1□□□□□ -1.59
DKK3Q9UBP4 AC116353.3-201ENST00000511215 249 ntBASIC5.1□□□□□ -1.59
DKK3Q9UBP4 HMGB3P13-201ENST00000511263 607 ntBASIC5.1□□□□□ -1.59
DKK3Q9UBP4 RNA5SP43-201ENST00000516559 110 ntBASIC5.1□□□□□ -1.59
DKK3Q9UBP4 AC105185.1-201ENST00000518705 535 ntBASIC5.1□□□□□ -1.59
DKK3Q9UBP4 AP001922.4-201ENST00000526967 290 ntBASIC5.1□□□□□ -1.59
DKK3Q9UBP4 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.1□□□□□ -1.59
DKK3Q9UBP4 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
DKK3Q9UBP4 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.1□□□□□ -1.59
DKK3Q9UBP4 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
DKK3Q9UBP4 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.1□□□□□ -1.59
DKK3Q9UBP4 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC5.1□□□□□ -1.59
DKK3Q9UBP4 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC5.1□□□□□ -1.59
DKK3Q9UBP4 ACTR3BP3-201ENST00000565577 979 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms