Protein–RNA interactions for Protein: Q9UBE8

NLK, Serine/threonine-protein kinase NLK, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLKQ9UBE8 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.41□□□□□ -1.7
NLKQ9UBE8 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NLKQ9UBE8 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NLKQ9UBE8 Y_RNA.25-201ENST00000362528 102 ntBASIC4.41□□□□□ -1.7
NLKQ9UBE8 RNU1-94P-201ENST00000362627 173 ntBASIC4.41□□□□□ -1.7
NLKQ9UBE8 SNORA68.2-201ENST00000391263 128 ntBASIC4.41□□□□□ -1.7
NLKQ9UBE8 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.41□□□□□ -1.7
NLKQ9UBE8 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.41□□□□□ -1.7
NLKQ9UBE8 CYCSP10-201ENST00000417973 294 ntBASIC4.41□□□□□ -1.7
NLKQ9UBE8 RBMY2KP-201ENST00000418221 992 ntBASIC4.41□□□□□ -1.7
NLKQ9UBE8 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.41□□□□□ -1.7
NLKQ9UBE8 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.41□□□□□ -1.7
NLKQ9UBE8 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.41□□□□□ -1.7
NLKQ9UBE8 FABP7P1-201ENST00000424004 391 ntBASIC4.41□□□□□ -1.7
NLKQ9UBE8 CKS1BP6-201ENST00000424932 240 ntBASIC4.41□□□□□ -1.7
NLKQ9UBE8 AL390023.1-201ENST00000428836 262 ntBASIC4.41□□□□□ -1.7
NLKQ9UBE8 AC005345.1-201ENST00000431868 217 ntBASIC4.41□□□□□ -1.7
NLKQ9UBE8 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NLKQ9UBE8 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
NLKQ9UBE8 CEACAMP1-201ENST00000434624 1035 ntBASIC4.41□□□□□ -1.7
NLKQ9UBE8 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.41□□□□□ -1.7
NLKQ9UBE8 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.41□□□□□ -1.7
NLKQ9UBE8 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.41□□□□□ -1.7
NLKQ9UBE8 AC108463.1-201ENST00000450258 347 ntBASIC4.41□□□□□ -1.7
NLKQ9UBE8 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.41□□□□□ -1.7
NLKQ9UBE8 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.41□□□□□ -1.7
NLKQ9UBE8 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.41□□□□□ -1.7
NLKQ9UBE8 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.41□□□□□ -1.7
NLKQ9UBE8 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.41□□□□□ -1.7
NLKQ9UBE8 MTND6P6-201ENST00000478031 263 ntBASIC4.41□□□□□ -1.7
NLKQ9UBE8 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.41□□□□□ -1.7
NLKQ9UBE8 RPS4XP20-201ENST00000505751 772 ntBASIC4.41□□□□□ -1.7
NLKQ9UBE8 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC4.41□□□□□ -1.7
NLKQ9UBE8 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.41□□□□□ -1.7
NLKQ9UBE8 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC4.41□□□□□ -1.7
NLKQ9UBE8 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.41□□□□□ -1.7
NLKQ9UBE8 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.41□□□□□ -1.7
NLKQ9UBE8 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.41□□□□□ -1.7
NLKQ9UBE8 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.41□□□□□ -1.7
NLKQ9UBE8 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.41□□□□□ -1.7
NLKQ9UBE8 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.41□□□□□ -1.7
NLKQ9UBE8 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.41□□□□□ -1.7
NLKQ9UBE8 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.41□□□□□ -1.7
NLKQ9UBE8 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.41□□□□□ -1.7
NLKQ9UBE8 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.41□□□□□ -1.7
NLKQ9UBE8 AC007225.2-201ENST00000562529 256 ntBASIC4.41□□□□□ -1.7
NLKQ9UBE8 AC103881.1-201ENST00000603476 538 ntBASIC4.41□□□□□ -1.7
NLKQ9UBE8 IMMP1LP3-201ENST00000604197 224 ntBASIC4.41□□□□□ -1.7
NLKQ9UBE8 Z94722.1-201ENST00000604328 474 ntBASIC4.41□□□□□ -1.7
NLKQ9UBE8 AC121247.2-201ENST00000604776 136 ntBASIC4.41□□□□□ -1.7
NLKQ9UBE8 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.41□□□□□ -1.7
NLKQ9UBE8 AL139418.1-201ENST00000613613 177 ntBASIC4.41□□□□□ -1.7
NLKQ9UBE8 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
NLKQ9UBE8 AL359757.1-201ENST00000623176 255 ntBASIC4.41□□□□□ -1.7
NLKQ9UBE8 AC079248.2-201ENST00000623779 326 ntBASIC4.41□□□□□ -1.7
NLKQ9UBE8 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.41□□□□□ -1.7
NLKQ9UBE8 AP003399.1-201ENST00000637534 361 ntBASIC4.41□□□□□ -1.7
NLKQ9UBE8 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NLKQ9UBE8 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.41□□□□□ -1.7
NLKQ9UBE8 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NLKQ9UBE8 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
NLKQ9UBE8 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
NLKQ9UBE8 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
NLKQ9UBE8 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NLKQ9UBE8 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.41□□□□□ -1.7
NLKQ9UBE8 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NLKQ9UBE8 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NLKQ9UBE8 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
NLKQ9UBE8 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
NLKQ9UBE8 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
NLKQ9UBE8 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
NLKQ9UBE8 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.4□□□□□ -1.7
NLKQ9UBE8 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
NLKQ9UBE8 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.4□□□□□ -1.7
NLKQ9UBE8 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
NLKQ9UBE8 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.4□□□□□ -1.7
NLKQ9UBE8 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
NLKQ9UBE8 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
NLKQ9UBE8 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
NLKQ9UBE8 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
NLKQ9UBE8 RNA5SP183-201ENST00000362452 119 ntBASIC4.4□□□□□ -1.71
NLKQ9UBE8 RNU6-216P-201ENST00000363282 104 ntBASIC4.4□□□□□ -1.71
NLKQ9UBE8 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.4□□□□□ -1.71
NLKQ9UBE8 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.4□□□□□ -1.71
NLKQ9UBE8 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
NLKQ9UBE8 SNORD96B-201ENST00000386148 79 ntBASIC4.4□□□□□ -1.71
NLKQ9UBE8 AL590084.2-201ENST00000401481 382 ntBASIC4.4□□□□□ -1.71
NLKQ9UBE8 RPL35AP24-201ENST00000413846 330 ntBASIC4.4□□□□□ -1.71
NLKQ9UBE8 SLC35E1P1-201ENST00000419313 864 ntBASIC4.4□□□□□ -1.71
NLKQ9UBE8 TIMM9P2-201ENST00000419324 266 ntBASIC4.4□□□□□ -1.71
NLKQ9UBE8 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.4□□□□□ -1.71
NLKQ9UBE8 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.4□□□□□ -1.71
NLKQ9UBE8 AC079355.1-201ENST00000421770 223 ntBASIC4.4□□□□□ -1.71
NLKQ9UBE8 AC108075.1-201ENST00000424692 529 ntBASIC4.4□□□□□ -1.71
NLKQ9UBE8 AL593851.1-201ENST00000426171 157 ntBASIC4.4□□□□□ -1.71
NLKQ9UBE8 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC4.4□□□□□ -1.71
NLKQ9UBE8 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.4□□□□□ -1.71
NLKQ9UBE8 RPS29P10-201ENST00000439197 166 ntBASIC4.4□□□□□ -1.71
NLKQ9UBE8 AL450263.2-201ENST00000439400 589 ntBASIC4.4□□□□□ -1.71
NLKQ9UBE8 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms